RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 ITGB3P05106 788 aa16.59■□□□□ 0.25
SEC13-201ENST00000337354 ZNF165P49910 485 aa16.59■□□□□ 0.25
SEC13-201ENST00000337354 LMBRD2Q68DH5 695 aaPredicted RBP16.59■□□□□ 0.25
SEC13-201ENST00000337354 PDE12Q6L8Q7 609 aaKnown RBP16.59■□□□□ 0.25
SEC13-201ENST00000337354 SV2AQ7L0J3 742 aa16.59■□□□□ 0.25
SEC13-201ENST00000337354 TMEM173Q86WV6 379 aaPredicted RBP16.59■□□□□ 0.25
SEC13-201ENST00000337354 CXorf38Q8TB03 319 aa16.59■□□□□ 0.25
SEC13-201ENST00000337354 LMCD1Q9NZU5 365 aa16.59■□□□□ 0.25
SEC13-201ENST00000337354 MAGEC2Q9UBF1 373 aaPredicted RBP16.59■□□□□ 0.25
SEC13-201ENST00000337354 SF3B1O75533 1304 aaKnown RBP eCLIP16.59■□□□□ 0.254e-7■■■■■ 63.1
SEC13-201ENST00000337354 PTPRJQ12913 1337 aa16.59■□□□□ 0.25
SEC13-201ENST00000337354 PHACTR2O75167 634 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 EFEMP2O95967 443 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 ATICP31939 592 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 GUCY2FP51841 1108 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 LILRA4P59901 499 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 MYO1EQ12965 1108 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 TRPC3Q13507 836 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 PTPROQ16827 1216 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 ZACNQ401N2 412 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 C1orf220Q5T0J3 134 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 TCERG1LQ5VWI1 586 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 KRT39Q6A163 491 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 FUT10Q6P4F1 479 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 C15orf39Q6ZRI6 1047 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 IRF2BP1Q8IU81 584 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 TRIM59Q8IWR1 403 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 GPR65Q8IYL9 337 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 POF1BQ8WVV4 589 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 RABGGTAQ92696 567 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 SLC35C1Q96A29 364 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 ZNF560Q96MR9 790 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 ANP32EQ9BTT0 268 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 TMEM8AQ9HCN3 771 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 ALG13Q9NP73 1137 aaKnown RBP16.58■□□□□ 0.24
SEC13-201ENST00000337354 CACNG4Q9UBN1 327 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 AGAP1Q9UPQ3 857 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 SSX2IPQ9Y2D8 614 aa16.58■□□□□ 0.24
SEC13-201ENST00000337354 ARHGEF37A1IGU5 675 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 GRM6O15303 877 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 PMM2O15305 246 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 CST3P01034 146 aaPredicted RBP16.57■□□□□ 0.24
SEC13-201ENST00000337354 SOD2P04179 222 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 KRT19P08727 400 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 IGFBP4P22692 258 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 EEF1GP26641 437 aaKnown RBP16.57■□□□□ 0.24
SEC13-201ENST00000337354 POLR2BP30876 1174 aaKnown RBP16.57■□□□□ 0.24
SEC13-201ENST00000337354 AARSP49588 968 aaKnown RBP eCLIP16.57■□□□□ 0.24
SEC13-201ENST00000337354 TAF6P49848 677 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 PPP3CAQ08209 521 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 BIRC3Q13489 604 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 SV2CQ496J9 727 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 DCAF17Q5H9S7 520 aaPredicted RBP16.57■□□□□ 0.24
SEC13-201ENST00000337354 LRSAM1Q6UWE0 723 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 CD300LGQ6UXG3 332 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 RNF168Q8IYW5 571 aaPredicted RBP16.57■□□□□ 0.24
SEC13-201ENST00000337354 C3orf58Q8NDZ4 430 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 BCL7CQ8WUZ0 217 aaPredicted RBP16.57■□□□□ 0.24
SEC13-201ENST00000337354 CNOT6LQ96LI5 555 aaKnown RBP16.57■□□□□ 0.24
SEC13-201ENST00000337354 NGRNQ9NPE2 291 aaKnown RBP16.57■□□□□ 0.24
SEC13-201ENST00000337354 SIX4Q9UIU6 781 aa16.57■□□□□ 0.24
SEC13-201ENST00000337354 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.57■□□□□ 0.24
SEC13-201ENST00000337354 CHD9Q3L8U1 2897 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 BECN2A8MW95 431 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 KPNA7A9QM74 516 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 SYN3O14994 580 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 P4HA2O15460 535 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 N4BP1O75113 896 aaKnown RBP16.56■□□□□ 0.24
SEC13-201ENST00000337354 STAU1O95793 577 aaKnown RBP16.56■□□□□ 0.24
SEC13-201ENST00000337354 TRIM49P0CI25 452 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 TRIM49CP0CI26 452 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 POU3F3P20264 500 aaPredicted RBP16.56■□□□□ 0.24
SEC13-201ENST00000337354 GCLMP48507 274 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 CETN1Q12798 172 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 NCAPHQ15003 741 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 SGSM1Q2NKQ1 1148 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 USP41Q3LFD5 358 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 TDRD10Q5VZ19 366 aaKnown RBP16.56■□□□□ 0.24
SEC13-201ENST00000337354 CREBRFQ8IUR6 639 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 VPS52Q8N1B4 723 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 MICALL1Q8N3F8 863 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 GDPD5Q8WTR4 605 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 TAF4BQ92750 862 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 SUSD3Q96L08 255 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 GPR62Q9BZJ7 368 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 TLR9Q9NR96 1032 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 CHST7Q9NS84 486 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 SAMSN1Q9NSI8 373 aaKnown RBP16.56■□□□□ 0.24
SEC13-201ENST00000337354 FANCLQ9NW38 375 aa16.56■□□□□ 0.24
SEC13-201ENST00000337354 EPOPA6NHQ4 379 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 F8W810 466 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 M0QZQ0 153 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 RFXAPO00287 272 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 CTSAP10619 480 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 MXI1P50539 228 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 ZNF445P59923 1031 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 NCOA4Q13772 614 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 TIGD5Q53EQ6 642 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 FAM171A1Q5VUB5 890 aa16.55■□□□□ 0.24
SEC13-201ENST00000337354 CDKAL1Q5VV42 579 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms