RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 C10orf76Q5T2E6 689 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 RINLQ6ZS11 566 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 NOP9Q86U38 636 aaKnown RBP11.78□□□□□ -0.52
CCDC87-201ENST00000333861 SLC13A5Q86YT5 568 aaPredicted RBP11.78□□□□□ -0.52
CCDC87-201ENST00000333861 ZFPM1Q8IX07 1006 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
CCDC87-201ENST00000333861 CPA5Q8WXQ8 436 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 STMN2Q93045 179 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 PACSIN3Q9UKS6 424 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 DNM3Q9UQ16 869 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 MAP3K7O43318 606 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 SORBS2O94875 1100 aaKnown RBP11.78□□□□□ -0.52
CCDC87-201ENST00000333861 PGM3O95394 542 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 PSMG1O95456 288 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 TMEM253P0C7T8 217 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 KITP10721 976 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 CA4P22748 312 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 CHRNA3P32297 505 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 SLC34A1Q06495 639 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 PPP3CAQ08209 521 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 DYNC1I2Q13409 638 aaKnown RBP11.78□□□□□ -0.52
CCDC87-201ENST00000333861 GRAPQ13588 217 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 GSTA5Q7RTV2 222 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 GRAPLQ8TC17 118 aaPredicted RBP11.78□□□□□ -0.52
CCDC87-201ENST00000333861 SH3TC2Q8TF17 1288 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 YIPF2Q9BWQ6 316 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 VPS37BQ9H9H4 285 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 SAYSD1Q9NPB0 183 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.78□□□□□ -0.52
CCDC87-201ENST00000333861 ANAPC5Q9UJX4 755 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 PHF24Q9UPV7 400 aa11.78□□□□□ -0.52
CCDC87-201ENST00000333861 CCDC160A6NGH7 325 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.52
CCDC87-201ENST00000333861 RNASEH1O60930 286 aaKnown RBP11.77□□□□□ -0.52
CCDC87-201ENST00000333861 FAM13AO94988 1023 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 BAG3O95817 575 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 CFHP08603 1231 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 TCF4P15884 667 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 ZNF76P36508 570 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 SKIV2L2P42285 1042 aaKnown RBP11.77□□□□□ -0.52
CCDC87-201ENST00000333861 YARSP54577 528 aaKnown RBP11.77□□□□□ -0.52
CCDC87-201ENST00000333861 MOGSQ13724 837 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 DBN1Q16643 649 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.77□□□□□ -0.52
CCDC87-201ENST00000333861 OTOAQ7RTW8 1153 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 SATL1Q86VE3 508 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 LRRC6Q86X45 466 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 PPFIBP2Q8ND30 876 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 AGBL1Q96MI9 1066 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 TRAPPC9Q96Q05 1148 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 KIFC3Q9BVG8 833 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 DDX4Q9NQI0 724 aaKnown RBP11.77□□□□□ -0.52
CCDC87-201ENST00000333861 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.77□□□□□ -0.52
CCDC87-201ENST00000333861 WRAP73Q9P2S5 460 aaPredicted RBP11.77□□□□□ -0.52
CCDC87-201ENST00000333861 ATXN10Q9UBB4 475 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 MARCOQ9UEW3 520 aaPredicted RBP11.77□□□□□ -0.52
CCDC87-201ENST00000333861 BZW2Q9Y6E2 419 aaKnown RBP11.77□□□□□ -0.52
CCDC87-201ENST00000333861 LRP5O75197 1615 aa11.77□□□□□ -0.52
CCDC87-201ENST00000333861 TTC4O95801 387 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 HMGB2P26583 209 aaKnown RBP11.77□□□□□ -0.53
CCDC87-201ENST00000333861 PTPN4P29074 926 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 MYL7Q01449 175 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 TMED1Q13445 227 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 SIX1Q15475 284 aaPredicted RBP11.77□□□□□ -0.53
CCDC87-201ENST00000333861 QRICH1Q2TAL8 776 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 COBLL1Q53SF7 1204 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 WASHC2DQ5SRD0 308 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 ZNF564Q8TBZ8 553 aaPredicted RBP11.77□□□□□ -0.53
CCDC87-201ENST00000333861 C10orf82Q8WW14 230 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 RBM17Q96I25 401 aaKnown RBP11.77□□□□□ -0.53
CCDC87-201ENST00000333861 HIC2Q96JB3 615 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 FAM161BQ96MY7 647 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 SERPINB12Q96P63 405 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 SMC6Q96SB8 1091 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 CBWD1Q9BRT8 395 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 ANO3Q9BYT9 981 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 FHDC1Q9C0D6 1143 aaPredicted RBP11.77□□□□□ -0.53
CCDC87-201ENST00000333861 TAOK3Q9H2K8 898 aa11.77□□□□□ -0.53
CCDC87-201ENST00000333861 FAM47DPA6NHR8 397 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 GSC2O15499 205 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 CALUO43852 315 aaPredicted RBP11.76□□□□□ -0.53
CCDC87-201ENST00000333861 TTLL1O95922 423 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 IFNB1P01574 187 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 EEF2P13639 858 aaKnown RBP11.76□□□□□ -0.53
CCDC87-201ENST00000333861 ADRA1DP25100 572 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 GRIA2P42262 883 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 MAPK6Q16659 721 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 CLNKQ7Z7G1 428 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 UBL4BQ8N7F7 174 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 MPP4Q96JB8 637 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 TSPYL2Q9H2G4 693 aaPredicted RBP11.76□□□□□ -0.53
CCDC87-201ENST00000333861 HEY2Q9UBP5 337 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 NENFQ9UMX5 172 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 PCDHGA4Q9Y5G9 962 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 SLC4A7Q9Y6M7 1214 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 SNED1Q8TER0 1413 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 PASKQ96RG2 1323 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 CCDC195A0A1B0GUA6 201 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 E7ENQ6 273 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 PODXLO00592 558 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms