RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 MAGEA4P43358 317 aa12.52□□□□□ -0.4
EFCAB13-201ENST00000331493 ELF3P78545 371 aaPredicted RBP12.52□□□□□ -0.4
EFCAB13-201ENST00000331493 TTLL6Q8N841 843 aa12.52□□□□□ -0.4
EFCAB13-201ENST00000331493 CCDC89Q8N998 374 aa12.52□□□□□ -0.4
EFCAB13-201ENST00000331493 GLIS1Q8NBF1 620 aa12.52□□□□□ -0.4
EFCAB13-201ENST00000331493 RBBP8NLQ8NC74 664 aaPredicted RBP12.52□□□□□ -0.4
EFCAB13-201ENST00000331493 ART4Q93070 314 aa12.52□□□□□ -0.4
EFCAB13-201ENST00000331493 SYT11Q9BT88 431 aa12.52□□□□□ -0.4
EFCAB13-201ENST00000331493 ADAM7Q9H2U9 754 aa12.52□□□□□ -0.4
EFCAB13-201ENST00000331493 ADGRA3Q8IWK6 1321 aa12.52□□□□□ -0.4
EFCAB13-201ENST00000331493 ZNF862O60290 1169 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 EGFRP00533 1210 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 KRT76Q01546 638 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 PDIA2Q13087 525 aaKnown RBP12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 DNAJC24Q6P3W2 148 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 RHOT1Q8IXI2 618 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 ZNF317Q96PQ6 595 aaPredicted RBP12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 TMEM237Q96Q45 408 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 TRAIPQ9BWF2 469 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 CALN1Q9BXU9 219 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 DCLK3Q9C098 648 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 FBXO40Q9UH90 709 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 DNPEPQ9ULA0 475 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 GINS2Q9Y248 185 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 PCDHB2Q9Y5E7 798 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 RREB1Q92766 1687 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 SBF2Q86WG5 1849 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 DIAPH2O60879 1101 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 CSDE1O75534 798 aaKnown RBP12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 GGPS1O95749 300 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 LACTBP83111 547 aaPredicted RBP12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 OVGP1Q12889 678 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 FASTKD3Q14CZ7 662 aaKnown RBP12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 ARHGEF18Q6ZSZ5 1173 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 TRMT10CQ7L0Y3 403 aaKnown RBP12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 CROCCP2Q86T23 111 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 C1orf131Q8NDD1 294 aaKnown RBP12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 OLIG1Q8TAK6 271 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 MOV10L1Q9BXT6 1211 aaKnown RBP12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 NEU2Q9Y3R4 380 aa12.52□□□□□ -0.41
EFCAB13-201ENST00000331493 F5H423 210 aaPredicted RBP12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 F8VP50 259 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 WNT10BO00744 389 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 SNX3O60493 162 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 RASSF9O75901 435 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 YY1P25490 414 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 JAK3P52333 1124 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 BASP1P80723 227 aaKnown RBP12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 IL9RQ01113 521 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 MPP2Q14168 576 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 CCDC60Q8IWA6 550 aaPredicted RBP12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 ANKRD35Q8N283 1001 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 ATP2A1O14983 1001 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 P4HA2O15460 535 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 CYP1A2P05177 515 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 GTF2H1P32780 548 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 DSG3P32926 999 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 RNASELQ05823 741 aaKnown RBP12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 EN1Q05925 392 aaPredicted RBP12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 RFX8Q6ZV50 586 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 CTAGE3PQ8IX95 158 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 LRRC8CQ8TDW0 803 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 MICAL1Q8TDZ2 1067 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 LRRN4Q8WUT4 740 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 SLC7A3Q8WY07 619 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 ERP27Q96DN0 273 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 SMC6Q96SB8 1091 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 ATP6V0A4Q9HBG4 840 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 JPH1Q9HDC5 661 aaPredicted RBP12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 PICK1Q9NRD5 415 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 ATP6V1G2O95670 118 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 TARSP26639 723 aaKnown RBP12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 CDO1Q16878 200 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 MFSD7Q6UXD7 560 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 OR5B17Q8NGF7 314 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 FBF1Q8TES7 1133 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 CLEC4DQ8WXI8 215 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 SEC14L1Q92503 715 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 RSRC1Q96IZ7 334 aaKnown RBP12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 PAGR1Q9BTK6 254 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 PXMP2Q9NR77 195 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 IKBKGQ9Y6K9 419 aa12.51□□□□□ -0.41
EFCAB13-201ENST00000331493 PSAPP07602 524 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 CCND2P30279 289 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 ALDH5A1P51649 535 aaPredicted RBP12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 WNT7BP56706 349 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 IGBP1P78318 339 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 SCARA3Q6AZY7 606 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 CCDC33Q8N5R6 958 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 MAIP1Q8WWC4 291 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 HSPH1Q92598 858 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 KDM4CQ9H3R0 1056 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 GINM1Q9NU53 330 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 AHDC1Q5TGY3 1603 aaPredicted RBP12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 CETPP11597 493 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 DRG2P55039 364 aaKnown RBP12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 ATP11AP98196 1134 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 PCNX4Q63HM2 1172 aa12.5□□□□□ -0.41
EFCAB13-201ENST00000331493 SLC39A4Q6P5W5 647 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms