RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 USP20Q9Y2K6 914 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 NEU2Q9Y3R4 380 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 SMCHD1A6NHR9 2005 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 PRPF4O43172 522 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNX20-202ENST00000330943 CENPCQ03188 943 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 NR1H3Q13133 447 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 CCDC6Q16204 474 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 HHATQ5VTY9 493 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 NLRP9Q7RTR0 991 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 APBB1IPQ7Z5R6 666 aaPredicted RBP15.32■□□□□ 0.04
SNX20-202ENST00000330943 FBXO41Q8TF61 875 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 DDX27Q96GQ7 796 aaKnown RBP15.32■□□□□ 0.04
SNX20-202ENST00000330943 LBHD1Q9BQE6 289 aaPredicted RBP15.32■□□□□ 0.04
SNX20-202ENST00000330943 TMEM206Q9H813 350 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 DCLRE1BQ9H816 532 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 DBNDD1Q9H9R9 158 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 UBN1Q9NPG3 1134 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 DLGAP2Q9P1A6 1054 aa15.32■□□□□ 0.04
SNX20-202ENST00000330943 MROH7Q68CQ1 1323 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 DDX39AO00148 427 aaKnown RBP15.31■□□□□ 0.04
SNX20-202ENST00000330943 ABLIM1O14639 778 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 NVLO15381 856 aaKnown RBP15.31■□□□□ 0.04
SNX20-202ENST00000330943 ADRB2P07550 413 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 ABHD2P08910 425 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 KRT5P13647 590 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 PECAM1P16284 738 aaPredicted RBP15.31■□□□□ 0.04
SNX20-202ENST00000330943 MUTP22033 750 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 MARK3P27448 753 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 PTPN4P29074 926 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 CMPK2Q5EBM0 449 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 PCNX4Q63HM2 1172 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 PADI6Q6TGC4 694 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 OTOAQ7RTW8 1153 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 MTDHQ86UE4 582 aaKnown RBP15.31■□□□□ 0.04
SNX20-202ENST00000330943 RBBP8NLQ8NC74 664 aaPredicted RBP15.31■□□□□ 0.04
SNX20-202ENST00000330943 ACCSQ96QU6 501 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 PIDD1Q9HB75 910 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 NMRK1Q9NWW6 199 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 LARSQ9P2J5 1176 aaKnown RBP15.31■□□□□ 0.04
SNX20-202ENST00000330943 ZNF831Q5JPB2 1677 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 ADAMTSL1Q8N6G6 1762 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 ATRNL1Q5VV63 1379 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 GDF11O95390 407 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 NPTXRO95502 500 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 FASTKD3Q14CZ7 662 aaKnown RBP15.31■□□□□ 0.04
SNX20-202ENST00000330943 CLEC16AQ2KHT3 1053 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 RGS9BPQ6ZS82 235 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 RELL1Q8IUW5 271 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 ZCCHC9Q8N567 271 aaKnown RBP15.31■□□□□ 0.04
SNX20-202ENST00000330943 DDX1Q92499 740 aaKnown RBP15.31■□□□□ 0.04
SNX20-202ENST00000330943 ZNF577Q9BSK1 485 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 VPS37BQ9H9H4 285 aa15.31■□□□□ 0.04
SNX20-202ENST00000330943 CPSF2Q9P2I0 782 aaKnown RBP15.31■□□□□ 0.04
SNX20-202ENST00000330943 SMG5Q9UPR3 1016 aaKnown RBP15.31■□□□□ 0.04
SNX20-202ENST00000330943 FGFR1P11362 822 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 PLS3P13797 630 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 RFC5P40937 340 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 LBRQ14739 615 aaKnown RBP15.3■□□□□ 0.04
SNX20-202ENST00000330943 KHDC1Q4VXA5 237 aaKnown RBP15.3■□□□□ 0.04
SNX20-202ENST00000330943 UCMAQ8WVF2 138 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 KIFAP3Q92845 792 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 MIPEPQ99797 713 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 DCTN4Q9UJW0 460 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 TRAFD1O14545 582 aaPredicted RBP15.3■□□□□ 0.04
SNX20-202ENST00000330943 GRIN3BO60391 1043 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 SP100P23497 879 aaPredicted RBP15.3■□□□□ 0.04
SNX20-202ENST00000330943 KLF1Q13351 362 aaPredicted RBP15.3■□□□□ 0.04
SNX20-202ENST00000330943 CCNG2Q16589 344 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 CBWD2Q8IUF1 395 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 EGFL6Q8IUX8 553 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 HELQQ8TDG4 1101 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 CPA5Q8WXQ8 436 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 STOML1Q9UBI4 398 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 A0A1W2PPM1 405 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 LMNAP02545 664 aaKnown RBP15.3■□□□□ 0.04
SNX20-202ENST00000330943 FDX1P10109 184 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 ARP10275 920 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 SSR1P43307 286 aaKnown RBP15.3■□□□□ 0.04
SNX20-202ENST00000330943 SGSM1Q2NKQ1 1148 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 FYB2Q5VWT5 728 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 LVRNQ6Q4G3 990 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 C4orf50Q6ZRC1 276 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 CLNKQ7Z7G1 428 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 ZNF333Q96JL9 665 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 SH2D3AQ9BRG2 576 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 ETAA1Q9NY74 926 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 PKD2L1Q9P0L9 805 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 NUMBLQ9Y6R0 609 aa15.3■□□□□ 0.04
SNX20-202ENST00000330943 WDR91A4D1P6 747 aa15.29■□□□□ 0.04
SNX20-202ENST00000330943 CD58P19256 250 aa15.29■□□□□ 0.04
SNX20-202ENST00000330943 VHLP40337 213 aa15.29■□□□□ 0.04
SNX20-202ENST00000330943 RCN1Q15293 331 aa15.29■□□□□ 0.04
SNX20-202ENST00000330943 SLC45A4Q5BKX6 768 aa15.29■□□□□ 0.04
SNX20-202ENST00000330943 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
SNX20-202ENST00000330943 DSTYKQ6XUX3 929 aa15.29■□□□□ 0.04
SNX20-202ENST00000330943 GLIS1Q8NBF1 620 aa15.29■□□□□ 0.04
SNX20-202ENST00000330943 RNF217Q8TC41 542 aa15.29■□□□□ 0.04
SNX20-202ENST00000330943 ZNF75CPQ92670 426 aaPredicted RBP15.29■□□□□ 0.04
SNX20-202ENST00000330943 RBM17Q96I25 401 aaKnown RBP15.29■□□□□ 0.04
SNX20-202ENST00000330943 NT5C1BQ96P26 610 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms