RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 LRRC19Q9H756 370 aa16.08■□□□□ 0.16
RGPD6-202ENST00000330331 CIDEBQ9UHD4 219 aa16.08■□□□□ 0.16
RGPD6-202ENST00000330331 PPM1HQ9ULR3 514 aa16.08■□□□□ 0.16
RGPD6-202ENST00000330331 STK10O94804 968 aaKnown RBP16.08■□□□□ 0.16
RGPD6-202ENST00000330331 NR3C1P04150 777 aa16.08■□□□□ 0.16
RGPD6-202ENST00000330331 CHRNDQ07001 517 aa16.08■□□□□ 0.16
RGPD6-202ENST00000330331 NR1H3Q13133 447 aa16.08■□□□□ 0.16
RGPD6-202ENST00000330331 PABPC4Q13310 644 aaKnown RBP eCLIP16.08■□□□□ 0.16
RGPD6-202ENST00000330331 RIPOR1Q6ZS17 1223 aa16.08■□□□□ 0.16
RGPD6-202ENST00000330331 RASSF3Q86WH2 238 aa16.08■□□□□ 0.16
RGPD6-202ENST00000330331 COA7Q96BR5 231 aa16.08■□□□□ 0.16
RGPD6-202ENST00000330331 CRNKL1Q9BZJ0 848 aaKnown RBP16.08■□□□□ 0.16
RGPD6-202ENST00000330331 GPR88Q9GZN0 384 aa16.08■□□□□ 0.16
RGPD6-202ENST00000330331 MKNK2Q9HBH9 465 aa16.08■□□□□ 0.16
RGPD6-202ENST00000330331 SPDYE16A6NNV3 312 aaPredicted RBP16.07■□□□□ 0.16
RGPD6-202ENST00000330331 RRM1P23921 792 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 CRABP2P29373 138 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 MAP3K10Q02779 954 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 KCNA1Q09470 495 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 ARSHQ5FYA8 562 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 MDH1BQ5I0G3 518 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 CCDC62Q6P9F0 684 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 CCDC174Q6PII3 467 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 FAM196AQ6ZSG2 479 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 SMIM5Q71RC9 77 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 SFR1Q86XK3 245 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 ZBTB8BQ8NAP8 495 aaPredicted RBP16.07■□□□□ 0.16
RGPD6-202ENST00000330331 PHF12Q96QT6 1004 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 RBM47A0AV96 593 aaKnown RBP16.07■□□□□ 0.16
RGPD6-202ENST00000330331 PRPF4O43172 522 aaKnown RBP eCLIP16.07■□□□□ 0.16
RGPD6-202ENST00000330331 GAS8O95995 478 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 TSPY3P0CV98 308 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 TSPY8P0CW00 308 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 ARFIP2P53365 341 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 EAPPQ56P03 285 aaPredicted RBP16.07■□□□□ 0.16
RGPD6-202ENST00000330331 SCUBE1Q8IWY4 988 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 SLC44A5Q8NCS7 719 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 LZICQ8WZA0 190 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 CATSPER2Q96P56 530 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 SLX1AQ9BQ83 275 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 TRAF3IP3Q9Y228 551 aa16.07■□□□□ 0.16
RGPD6-202ENST00000330331 TMEM221A6NGB7 291 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 A8MXQ7 604 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 B2RBV5 119 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 ADRA1DP25100 572 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 SH3BGRP55822 239 aaPredicted RBP16.06■□□□□ 0.16
RGPD6-202ENST00000330331 RC3H1Q5TC82 1133 aaKnown RBP16.06■□□□□ 0.16
RGPD6-202ENST00000330331 NSMFQ6X4W1 530 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 RBM44Q6ZP01 1051 aaKnown RBP16.06■□□□□ 0.16
RGPD6-202ENST00000330331 PANX3Q96QZ0 392 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 AGPAT1Q99943 283 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 TRAIPQ9BWF2 469 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 MAF1Q9H063 256 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 WNT8AQ9H1J5 351 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 ARHGEF38Q9NXL2 777 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 ZNF711Q9Y462 761 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 FOXN3O00409 490 aaPredicted RBP16.06■□□□□ 0.16
RGPD6-202ENST00000330331 CALUO43852 315 aaPredicted RBP16.06■□□□□ 0.16
RGPD6-202ENST00000330331 SUSD4Q5VX71 490 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 KLC3Q6P597 504 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 ACAD11Q709F0 780 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 ZNF554Q86TJ5 538 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 LRRC6Q86X45 466 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 C12orf50Q8NA57 414 aaPredicted RBP16.06■□□□□ 0.16
RGPD6-202ENST00000330331 HAS1Q92839 578 aa16.06■□□□□ 0.16
RGPD6-202ENST00000330331 TDRKHQ9Y2W6 561 aaKnown RBP16.06■□□□□ 0.16
RGPD6-202ENST00000330331 COL1A1P02452 1464 aaPredicted RBP16.05■□□□□ 0.16
RGPD6-202ENST00000330331 H3BRJ5 948 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 TXNDC9O14530 226 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 RARBP10826 455 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 MAGEA4P43358 317 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 AP2B1P63010 937 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 GPC5P78333 572 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 MED21Q13503 144 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 CEP70Q8NHQ1 597 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 TUBB6Q9BUF5 446 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 TMEM120AQ9BXJ8 343 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 MAK16Q9BXY0 300 aaKnown RBP16.05■□□□□ 0.16
RGPD6-202ENST00000330331 TYW1Q9NV66 732 aaKnown RBP16.05■□□□□ 0.16
RGPD6-202ENST00000330331 PCDHA12Q9UN75 941 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 GNPATO15228 680 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 ATP9BO43861 1147 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 PLS3P13797 630 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 RFC4P35249 363 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 MECOMQ03112 1051 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 SFT2D3Q587I9 215 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 LPCAT4Q643R3 524 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.05■□□□□ 0.16
RGPD6-202ENST00000330331 CD101Q93033 1021 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 MKNK1Q9BUB5 465 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 ACP6Q9NPH0 428 aa16.05■□□□□ 0.16
RGPD6-202ENST00000330331 SMG5Q9UPR3 1016 aaKnown RBP16.05■□□□□ 0.16
RGPD6-202ENST00000330331 RPS6KA4O75676 772 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 STAT3P40763 770 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 PTK6Q13882 451 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 SEPT7Q16181 437 aaKnown RBP16.04■□□□□ 0.16
RGPD6-202ENST00000330331 UBE2SQ16763 222 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 TMEM259Q4ZIN3 620 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 OR6Y1Q8NGX8 325 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 ZNF653Q96CK0 615 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms