RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 NFRKBQ6P4R8 1299 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 ARHGEF26Q96DR7 871 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 SLC4A9Q96Q91 983 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 PCSK1NQ9UHG2 260 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 DPP7Q9UHL4 492 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 AKAP12Q02952 1782 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 GNL1P36915 607 aaPredicted RBP12.03□□□□□ -0.48
COL4A5-201ENST00000328300 ANKRD20A4Q4UJ75 823 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 ANKRD20A8PQ5CZ79 823 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 ANKRD20A2Q5SQ80 823 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 ANKRD20A1Q5TYW2 823 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 IZUMO3Q5VZ72 239 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 ZPBP2Q6X784 338 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 RIOX2Q8IUF8 465 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 TC2NQ8N9U0 490 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 PPHLN1Q8NEY8 458 aaKnown RBP12.03□□□□□ -0.48
COL4A5-201ENST00000328300 MTG1Q9BT17 334 aaPredicted RBP12.03□□□□□ -0.48
COL4A5-201ENST00000328300 HEMGNQ9BXL5 484 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 ABHD16BQ9H3Z7 469 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 DPP3Q9NY33 737 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 PAK5Q9P286 719 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 KANSL3Q9P2N6 904 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 PLAGL2Q9UPG8 496 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 PIK3C2AO00443 1686 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 A0A0A6YYK5 440 aaPredicted RBP12.03□□□□□ -0.48
COL4A5-201ENST00000328300 KCTD16Q68DU8 428 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 SEPT8Q92599 483 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 ALKBH8Q96BT7 664 aaKnown RBP12.03□□□□□ -0.48
COL4A5-201ENST00000328300 TRIM55Q9BYV6 548 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 ITGA11Q9UKX5 1188 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 FRMPD4Q14CM0 1322 aa12.02□□□□□ -0.48
COL4A5-201ENST00000328300 TOB1P50616 345 aaPredicted RBP12.02□□□□□ -0.48
COL4A5-201ENST00000328300 EIF3EP60228 445 aaKnown RBP12.02□□□□□ -0.48
COL4A5-201ENST00000328300 KRT17Q04695 432 aa12.02□□□□□ -0.48
COL4A5-201ENST00000328300 ARID5BQ14865 1188 aa12.02□□□□□ -0.48
COL4A5-201ENST00000328300 ZC2HC1CQ53FD0 456 aaPredicted RBP12.02□□□□□ -0.48
COL4A5-201ENST00000328300 NT5DC1Q5TFE4 455 aa12.02□□□□□ -0.48
COL4A5-201ENST00000328300 ZNF720Q7Z2F6 126 aa12.02□□□□□ -0.48
COL4A5-201ENST00000328300 YAF2Q8IY57 180 aa12.02□□□□□ -0.48
COL4A5-201ENST00000328300 TSPAN18Q96SJ8 248 aa12.02□□□□□ -0.48
COL4A5-201ENST00000328300 NDE1Q9NXR1 346 aa12.02□□□□□ -0.48
COL4A5-201ENST00000328300 LCP1P13796 627 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 GPS1Q13098 491 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 IQSEC1Q6DN90 963 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 TTC23LQ6PF05 361 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 SHCBP1Q8NEM2 672 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 DRC3Q9H069 523 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 TRIM33Q9UPN9 1127 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 C3orf70A6NLC5 250 aaPredicted RBP12.02□□□□□ -0.49
COL4A5-201ENST00000328300 FAM200BP0CF97 657 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 ARP10275 920 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 NPTX2P47972 431 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 NLRP11P59045 1033 aaKnown RBP12.02□□□□□ -0.49
COL4A5-201ENST00000328300 CCDC15Q0P6D6 951 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 ACAD10Q6JQN1 1059 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 SPATA4Q8NEY3 305 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 TRIM54Q9BYV2 358 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 TRAF3IP3Q9Y228 551 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 NFASCO94856 1347 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 SNX2O60749 519 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 SEC31AO94979 1220 aaKnown RBP12.02□□□□□ -0.49
COL4A5-201ENST00000328300 LUC7L3O95232 432 aaKnown RBP12.02□□□□□ -0.49
COL4A5-201ENST00000328300 FGRP09769 529 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 COPS2P61201 443 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 PSMD6Q15008 389 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 TRADDQ15628 312 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 FOXR2Q6PJQ5 311 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 BTNL9Q6UXG8 535 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 USP49Q70CQ1 688 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 TSPAN17Q96FV3 270 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 CDK5RAP1Q96SZ6 601 aaKnown RBP12.02□□□□□ -0.49
COL4A5-201ENST00000328300 CYTH2Q99418 400 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 TARS2Q9BW92 718 aaKnown RBP12.02□□□□□ -0.49
COL4A5-201ENST00000328300 HSPA4LO95757 839 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 AKR1A1P14550 325 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 CDR2Q01850 454 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 NME3Q13232 169 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 FRA10AC1Q70Z53 315 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 FEZF2Q8TBJ5 459 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 ZNF507Q8TCN5 953 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 USP13Q92995 863 aaPredicted RBP12.02□□□□□ -0.49
COL4A5-201ENST00000328300 PRDM16Q9HAZ2 1276 aa12.02□□□□□ -0.49
COL4A5-201ENST00000328300 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.02□□□□□ -0.49
COL4A5-201ENST00000328300 PDHXO00330 501 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 TMCC1O94876 653 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 LHX1P48742 406 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 ALDH5A1P51649 535 aaPredicted RBP12.01□□□□□ -0.49
COL4A5-201ENST00000328300 RHBDL3P58872 404 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 ARHGAP15Q53QZ3 475 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 MMS22LQ6ZRQ5 1243 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 CFAP61Q8NHU2 1237 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 HPS3Q969F9 1004 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 SLITRK1Q96PX8 696 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 AP1B1Q10567 949 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 SNCBQ16143 134 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 RIBC1Q8N443 379 aaPredicted RBP12.01□□□□□ -0.49
COL4A5-201ENST00000328300 CALML6Q8TD86 181 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 CARD9Q9H257 536 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 ASB7Q9H672 318 aa12.01□□□□□ -0.49
COL4A5-201ENST00000328300 RRN3Q9NYV6 651 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms