RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 TMEM8AQ9HCN3 771 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 ZMYND8Q9ULU4 1186 aaPredicted RBP17.77■□□□□ 0.43
SSH1-201ENST00000326470 TRAFD1O14545 582 aaPredicted RBP17.76■□□□□ 0.43
SSH1-201ENST00000326470 UNGP13051 313 aaPredicted RBP17.76■□□□□ 0.43
SSH1-201ENST00000326470 KLRC2P26717 231 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 STAT2P52630 851 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 SH3TC2Q8TF17 1288 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 DHX38Q92620 1227 aaKnown RBP17.76■□□□□ 0.43
SSH1-201ENST00000326470 NUDCD1Q96RS6 583 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 KIAA1586Q9HCI6 787 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 SPATS2LQ9NUQ6 558 aaKnown RBP17.76■□□□□ 0.43
SSH1-201ENST00000326470 SMG5Q9UPR3 1016 aaKnown RBP17.76■□□□□ 0.43
SSH1-201ENST00000326470 BRWD3Q6RI45 1802 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 UBR3Q6ZT12 1888 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 LOXHD1Q8IVV2 1947 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 ADSSP30520 456 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 PEX19P40855 299 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 JAG1P78504 1218 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 RNASELQ05823 741 aaKnown RBP17.76■□□□□ 0.43
SSH1-201ENST00000326470 SNRNP35Q16560 246 aaKnown RBP17.76■□□□□ 0.43
SSH1-201ENST00000326470 LONP2Q86WA8 852 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 PARD3BQ8TEW8 1205 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 C10orf82Q8WW14 230 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 CCDC127Q96BQ5 260 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 IWS1Q96ST2 819 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 TRABDQ9H4I3 376 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 SENP1Q9P0U3 644 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 RPL26L1Q9UNX3 145 aaKnown RBP17.76■□□□□ 0.43
SSH1-201ENST00000326470 PCDHAC2Q9Y5I4 1007 aa17.76■□□□□ 0.43
SSH1-201ENST00000326470 GH2P01242 217 aa17.75■□□□□ 0.43
SSH1-201ENST00000326470 FDX1P10109 184 aa17.75■□□□□ 0.43
SSH1-201ENST00000326470 MYBL1P10243 752 aa17.75■□□□□ 0.43
SSH1-201ENST00000326470 TRIM68Q6AZZ1 485 aa17.75■□□□□ 0.43
SSH1-201ENST00000326470 ANO7Q6IWH7 933 aa17.75■□□□□ 0.43
SSH1-201ENST00000326470 ANKS1BQ7Z6G8 1248 aa17.75■□□□□ 0.43
SSH1-201ENST00000326470 FBXL13Q8NEE6 735 aa17.75■□□□□ 0.43
SSH1-201ENST00000326470 ASAP3Q8TDY4 903 aa17.75■□□□□ 0.43
SSH1-201ENST00000326470 TAS1R2Q8TE23 839 aa17.75■□□□□ 0.43
SSH1-201ENST00000326470 RAB20Q9NX57 234 aa17.75■□□□□ 0.43
SSH1-201ENST00000326470 GRID1Q9ULK0 1009 aa17.75■□□□□ 0.43
SSH1-201ENST00000326470 ZNFX1Q9P2E3 1918 aaKnown RBP17.75■□□□□ 0.43
SSH1-201ENST00000326470 KLRG2A4D1S0 409 aaPredicted RBP17.74■□□□□ 0.43
SSH1-201ENST00000326470 P4HBP07237 508 aaKnown RBP17.74■□□□□ 0.43
SSH1-201ENST00000326470 ATP6V1C1P21283 382 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 RARRES1P49788 294 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 P3H1Q32P28 736 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 MIER3Q7Z3K6 550 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.74■□□□□ 0.43
SSH1-201ENST00000326470 LRRC8CQ8TDW0 803 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 FAM118BQ9BPY3 351 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 SAYSD1Q9NPB0 183 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 DDX39AO00148 427 aaKnown RBP17.74■□□□□ 0.43
SSH1-201ENST00000326470 ABLIM1O14639 778 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 PSTPIP1O43586 416 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 PROSCO94903 275 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 EPHB2P29323 1055 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 LMNTD2Q8IXW0 634 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 TRIM11Q96F44 468 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 TTC25Q96NG3 672 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 SMC6Q96SB8 1091 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 OSBPL8Q9BZF1 889 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 ZHX2Q9Y6X8 837 aa17.74■□□□□ 0.43
SSH1-201ENST00000326470 KRT5P13647 590 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 RPA3P35244 121 aaPredicted RBP17.73■□□□□ 0.43
SSH1-201ENST00000326470 PKN2Q16513 984 aaKnown RBP17.73■□□□□ 0.43
SSH1-201ENST00000326470 PCNX4Q63HM2 1172 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 ZNF449Q6P9G9 518 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 POTEAQ6S8J7 498 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 MRIQ9BWK5 157 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 TLE6Q9H808 572 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 SYNPO2Q9UMS6 1093 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 SLC16A4O15374 487 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
SSH1-201ENST00000326470 CBX6O95503 412 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 KRT15P19012 456 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 ATP4AP20648 1035 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 PCK1P35558 622 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 MRPS35P82673 323 aaKnown RBP17.73■□□□□ 0.43
SSH1-201ENST00000326470 SLC45A4Q5BKX6 768 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 CCDC174Q6PII3 467 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 GSTA5Q7RTV2 222 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 PHLDB2Q86SQ0 1253 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 RHOT1Q8IXI2 618 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 FBXO41Q8TF61 875 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 MXRA8Q9BRK3 442 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 YIPF3Q9GZM5 350 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 CYLDQ9NQC7 956 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 UMODL1Q5DID0 1318 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 MYPNQ86TC9 1320 aa17.73■□□□□ 0.43
SSH1-201ENST00000326470 POC1B-GALNT4F8VUJ3 575 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 CALCAP01258 141 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 PTPN4P29074 926 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 NCKAP1LP55160 1127 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 PEX3P56589 373 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 DAB2IPQ5VWQ8 1189 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 KATNAL2Q8IYT4 538 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 CPA5Q8WXQ8 436 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 DENND2DQ9H6A0 471 aaPredicted RBP17.72■□□□□ 0.43
SSH1-201ENST00000326470 TOPORSQ9NS56 1045 aaPredicted RBP17.72■□□□□ 0.43
SSH1-201ENST00000326470 MRPL11Q9Y3B7 192 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms