RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SWT1Q5T5J6 900 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 TRIM68Q6AZZ1 485 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 CDR2LQ86X02 465 aaPredicted RBP13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.68□□□□□ -0.223e-18■■■□□ 16.7
HMGCS1-201ENST00000325110 AGAP1Q9UPQ3 857 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 NHSQ6T4R5 1651 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 H0Y3Z8 333 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 ASAP2O43150 1006 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 CDH16O75309 829 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 BANF1O75531 89 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 MAGEA4P43358 317 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 NOP14P78316 857 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 WDR78Q5VTH9 848 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 DNAJC24Q6P3W2 148 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 ANKRD35Q8N283 1001 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 RBBP8NLQ8NC74 664 aaPredicted RBP13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 SPOCK2Q92563 424 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 P3H4Q92791 437 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 MCEEQ96PE7 176 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 PAGR1Q9BTK6 254 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 MRPL47Q9HD33 250 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 SAE1Q9UBE0 346 aaPredicted RBP13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 ARFGEF1Q9Y6D6 1849 aa13.68□□□□□ -0.22
HMGCS1-201ENST00000325110 MARK3P27448 753 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 MAN1A1P33908 653 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 BPIFB4P59827 614 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 ATP11AP98196 1134 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 TFAMQ00059 246 aaKnown RBP13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 ACCSLQ4AC99 568 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 PCNX4Q63HM2 1172 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 MAP4K3Q8IVH8 894 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 C4orf19Q8IY42 314 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 SERPINB12Q96P63 405 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 SMC6Q96SB8 1091 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 MRIQ9BWK5 157 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 MOV10L1Q9BXT6 1211 aaKnown RBP13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 ROPN1BQ9BZX4 212 aaPredicted RBP13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 ROPN1Q9HAT0 212 aaPredicted RBP13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 ATP6V0A4Q9HBG4 840 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 WHRNQ9P202 907 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 DCTN4Q9UJW0 460 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 COL24A1Q17RW2 1714 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 ELF1P32519 619 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 CYP4A22Q5TCH4 519 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 LRRC8CQ8TDW0 803 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 CENPTQ96BT3 561 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 FHDC1Q9C0D6 1143 aaPredicted RBP13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 LRRC19Q9H756 370 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 ARL2BPQ9Y2Y0 163 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 NEU2Q9Y3R4 380 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 DIAPH2O60879 1101 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 ALDH5A1P51649 535 aaPredicted RBP13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 RPL7AP62424 266 aaKnown RBP13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 ZBTB16Q05516 673 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 PDIA2Q13087 525 aaKnown RBP13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 TRPC3Q13507 836 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 ERP27Q96DN0 273 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 PCSK1NQ9UHG2 260 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 RIPK3Q9Y572 518 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 UBIAD1Q9Y5Z9 338 aa13.67□□□□□ -0.22
HMGCS1-201ENST00000325110 ADGRA3Q8IWK6 1321 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 FSCN2O14926 492 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 ZNF862O60290 1169 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 CCND2P30279 289 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 SFNP31947 248 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 GPC3P51654 580 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 SESN3P58005 492 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 ORC1Q13415 861 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 ITIH4Q14624 930 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 BBS9Q3SYG4 887 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 KCNT1Q5JUK3 1230 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 ZBTB41Q5SVQ8 909 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 WNK4Q96J92 1243 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 PPP1R16BQ96T49 567 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 SLCO1B3Q9NPD5 702 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 PXMP2Q9NR77 195 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 DNPEPQ9ULA0 475 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 PSAPP07602 524 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 WEE2P0C1S8 567 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 BRD2P25440 801 aaKnown RBP13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 ERFP50548 548 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 HMGCS2P54868 508 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 SLC17A8Q8NDX2 589 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 MCPH1Q8NEM0 835 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 NSMCE1Q8WV22 266 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 CLEC4DQ8WXI8 215 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 SLC7A3Q8WY07 619 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 JDP2Q8WYK2 163 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 CD101Q93033 1021 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 TRIM11Q96F44 468 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 TMEM121Q9BTD3 319 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 JPH1Q9HDC5 661 aaPredicted RBP13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 AAASQ9NRG9 546 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 UMODL1Q5DID0 1318 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 SPATA31A6Q5VVP1 1343 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 MROH7Q68CQ1 1323 aa13.66□□□□□ -0.22
HMGCS1-201ENST00000325110 PROSCO94903 275 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 NQO1P15559 274 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms