RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 DEFB103AP81534 67 aa16.44■□□□□ 0.22
PRPF3-201ENST00000324862 DRAP1Q14919 205 aaPredicted RBP16.44■□□□□ 0.22
PRPF3-201ENST00000324862 ZNF699Q32M78 642 aa16.44■□□□□ 0.22
PRPF3-201ENST00000324862 WDR72Q3MJ13 1102 aa16.44■□□□□ 0.22
PRPF3-201ENST00000324862 PAN2Q504Q3 1202 aaKnown RBP16.44■□□□□ 0.22
PRPF3-201ENST00000324862 ZNF280BQ86YH2 543 aa16.44■□□□□ 0.22
PRPF3-201ENST00000324862 CRIPAKQ8N1N5 446 aa16.44■□□□□ 0.22
PRPF3-201ENST00000324862 PGBD4Q96DM1 585 aa16.44■□□□□ 0.22
PRPF3-201ENST00000324862 CHP1Q99653 195 aa16.44■□□□□ 0.22
PRPF3-201ENST00000324862 UBQLN1Q9UMX0 589 aaKnown RBP16.44■□□□□ 0.22
PRPF3-201ENST00000324862 FOXN3O00409 490 aaPredicted RBP16.43■□□□□ 0.22
PRPF3-201ENST00000324862 SPTLC1O15269 473 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 THP07101 528 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 CLCNKBP51801 687 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 ZBED6P86452 979 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 IKBKEQ14164 716 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 C9orf57Q5W0N0 161 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 PDXDC1Q6P996 788 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 CNKSR3Q6P9H4 555 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 TMEM139Q8IV31 216 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 C3orf58Q8NDZ4 430 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 BEST2Q8NFU1 509 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 SPAG5Q96R06 1193 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 A0A1W2PQJ5 194 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 WEE2P0C1S8 567 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 CAPN2P17655 700 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 CDH8P55286 799 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 JAM2P57087 298 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 TRIM14Q14142 442 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 MTF1Q14872 753 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 WDR44Q5JSH3 913 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 TMEM199Q8N511 208 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 HPDLQ96IR7 371 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 C1orf112Q9NSG2 853 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 TMEM161AQ9NX61 479 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 PRKAG2Q9UGJ0 569 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 PCDHB7Q9Y5E2 793 aa16.43■□□□□ 0.22
PRPF3-201ENST00000324862 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.43■□□□□ 0.22
PRPF3-201ENST00000324862 F8VZ95 297 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 EVI5O60447 810 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 GFPT2O94808 682 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 DDHD2O94830 711 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 PARNO95453 639 aaKnown RBP16.42■□□□□ 0.22
PRPF3-201ENST00000324862 EOMESO95936 686 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 TPM1P09493 284 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 CCZ1BP86790 482 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 CCZ1P86791 482 aaPredicted RBP16.42■□□□□ 0.22
PRPF3-201ENST00000324862 CNGA4Q8IV77 575 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 HASPINQ8TF76 798 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 DPF3Q92784 378 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 DNAJC7Q99615 494 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 ITGA11Q9UKX5 1188 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 DERAQ9Y315 318 aa16.42■□□□□ 0.22
PRPF3-201ENST00000324862 SOWAHDA6NJG2 315 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 SKIP12755 728 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 CD58P19256 250 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 USP8P40818 1118 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 GSDMDP57764 484 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 SGSM1Q2NKQ1 1148 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 GLB1LQ6UWU2 654 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 NT5DC4Q86YG4 428 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 OR8K1Q8NGG5 319 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 SDCBP2Q9H190 292 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 SMYD3Q9H7B4 428 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 PBX3P40426 434 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 ASPAP45381 313 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 RBP5P82980 135 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 STK33Q9BYT3 514 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 IMPG2Q9BZV3 1241 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 TBC1D13Q9NVG8 400 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 DNAJB4Q9UDY4 337 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 LRFN2Q9ULH4 789 aa16.41■□□□□ 0.22
PRPF3-201ENST00000324862 ANO9A1A5B4 782 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 PIRO00625 290 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 ITGB1P05556 798 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 RFC2P35250 354 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 ORC1Q13415 861 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 CUL2Q13617 745 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 ZNF394Q53GI3 561 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 ZNF365Q70YC5 407 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 CCDC150Q8NCX0 1101 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 CXXC1Q9P0U4 656 aaPredicted RBP16.4■□□□□ 0.22
PRPF3-201ENST00000324862 FBXL5Q9UKA1 691 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 RALGAPA2Q2PPJ7 1873 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 SCN1AP35498 2009 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 I3L4J1 428 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 CDR1P51861 262 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 NOMO2Q5JPE7 1267 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 ZNF397Q8NF99 534 aaPredicted RBP16.4■□□□□ 0.22
PRPF3-201ENST00000324862 CASD1Q96PB1 797 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 BAG1Q99933 345 aaPredicted RBP16.4■□□□□ 0.22
PRPF3-201ENST00000324862 IL23AQ9NPF7 189 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 ARHGAP20Q9P2F6 1191 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 PYCARDQ9ULZ3 195 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 SNX9Q9Y5X1 595 aa16.4■□□□□ 0.22
PRPF3-201ENST00000324862 CEP290O15078 2479 aa16.39■□□□□ 0.22
PRPF3-201ENST00000324862 HCRTO43612 131 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 WDR5P61964 334 aaKnown RBP16.39■□□□□ 0.21
PRPF3-201ENST00000324862 ZNF667Q5HYK9 610 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 HGSNATQ68CP4 663 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms