RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 HSPH1Q92598 858 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 ERLEC1Q96DZ1 483 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 ZSWIM1Q9BR11 485 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 APEX2Q9UBZ4 518 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 PNMA6FA0A0J9YX94 578 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 KIAA0391O15091 583 aaKnown RBP7.95□□□□□ -1.14
CDHR3-201ENST00000317716 BANF1O75531 89 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 DGKIO75912 1065 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 GSTT1P30711 240 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 PTGER2P43116 358 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 TGFB2P61812 414 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 ICA1Q05084 483 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 PPP1R15BQ5SWA1 713 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 STYK1Q6J9G0 422 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 KRT80Q6KB66 452 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 FRMD5Q7Z6J6 570 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 BBOF1Q8ND07 529 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 ZSWIM2Q8NEG5 633 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 DHX38Q92620 1227 aaKnown RBP7.95□□□□□ -1.14
CDHR3-201ENST00000317716 ZNF577Q9BSK1 485 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 STK33Q9BYT3 514 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 SUDS3Q9H7L9 328 aaPredicted RBP7.95□□□□□ -1.14
CDHR3-201ENST00000317716 DCLRE1BQ9H816 532 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 XAB2Q9HCS7 855 aaKnown RBP7.95□□□□□ -1.14
CDHR3-201ENST00000317716 FBXO6Q9NRD1 293 aaPredicted RBP7.95□□□□□ -1.14
CDHR3-201ENST00000317716 SEPT10Q9P0V9 454 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 CNOT7Q9UIV1 285 aaKnown RBP7.95□□□□□ -1.14
CDHR3-201ENST00000317716 MYH8P13535 1937 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 USP54Q70EL1 1684 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 KDM3BQ7LBC6 1761 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 WDR64B1ANS9 1081 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 TISP43B9A030 160 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 ANKRD63C9JTQ0 380 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 PIK3R2O00459 728 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 MMP14P50281 582 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 PRAMEP78395 509 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 PPATQ06203 517 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 ACAP1Q15027 740 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 SMTNL2Q2TAL5 461 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 FAXCQ5TGI0 409 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 PALB2Q86YC2 1186 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 NME8Q8N427 588 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 CCDC33Q8N5R6 958 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 FAM13CQ8NE31 585 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 SCFD2Q8WU76 684 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 GRAMD1AQ96CP6 724 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 ZNF668Q96K58 619 aaPredicted RBP7.95□□□□□ -1.14
CDHR3-201ENST00000317716 CSRNP1Q96S65 589 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 BCAS3Q9H6U6 928 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 IL17RBQ9NRM6 502 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 CORO1CQ9ULV4 474 aaPredicted RBP7.95□□□□□ -1.14
CDHR3-201ENST00000317716 NUP98P52948 1817 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 PDE5AO76074 875 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 ZWINTO95229 277 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 MYL2P10916 166 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 ADRA1DP25100 572 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 VAMP7P51809 220 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 OSTNP61366 133 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 ASPRV1Q53RT3 343 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 UBAP2Q5T6F2 1119 aaKnown RBP7.95□□□□□ -1.14
CDHR3-201ENST00000317716 WLSQ5T9L3 541 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 LGSNQ5TDP6 509 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 LLGL2Q6P1M3 1020 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 DARS2Q6PI48 645 aaKnown RBP7.95□□□□□ -1.14
CDHR3-201ENST00000317716 TMEM270Q6UE05 265 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 CATSPER3Q86XQ3 398 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 PRELID2Q8N945 189 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 LRGUKQ96M69 825 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 PURBQ96QR8 312 aaKnown RBP7.95□□□□□ -1.14
CDHR3-201ENST00000317716 NAP1L4Q99733 375 aaKnown RBP7.95□□□□□ -1.14
CDHR3-201ENST00000317716 AMNQ9BXJ7 453 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 CYP39A1Q9NYL5 469 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 SERPINB13Q9UIV8 391 aa7.95□□□□□ -1.14
CDHR3-201ENST00000317716 THSD7AQ9UPZ6 1657 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 NEMP1O14524 444 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 TLR3O15455 904 aaKnown RBP7.94□□□□□ -1.14
CDHR3-201ENST00000317716 UNC5CO95185 931 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 RASA1P20936 1047 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 TRPC3Q13507 836 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 STAT4Q14765 748 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 LRRC74BQ6ZQY2 392 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 C3orf62Q6ZUJ4 267 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 UTS2BQ765I0 119 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 PRPF39Q86UA1 669 aaKnown RBP7.94□□□□□ -1.14
CDHR3-201ENST00000317716 LRRC6Q86X45 466 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 ECHDC2Q86YB7 292 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 CRLF3Q8IUI8 442 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 NUDCD3Q8IVD9 361 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 RNF148Q8N7C7 305 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 ATL2Q8NHH9 583 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 MPP4Q96JB8 637 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 EIF2AK1Q9BQI3 630 aaKnown RBP7.94□□□□□ -1.14
CDHR3-201ENST00000317716 COA1Q9GZY4 146 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 WNT8AQ9H1J5 351 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 MRPL46Q9H2W6 279 aaKnown RBP7.94□□□□□ -1.14
CDHR3-201ENST00000317716 NMRK1Q9NWW6 199 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 NXF1Q9UBU9 619 aaKnown RBP7.94□□□□□ -1.14
CDHR3-201ENST00000317716 APPL1Q9UKG1 709 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 ZNRF3Q9ULT6 936 aa7.94□□□□□ -1.14
CDHR3-201ENST00000317716 GINS2Q9Y248 185 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms