RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SNED1Q8TER0 1413 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 MYO1CO00159 1063 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 EPHX2P34913 555 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 COILP38432 576 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 BYSLQ13895 437 aaKnown RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 IRF2BP2Q7Z5L9 587 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 ABI1Q8IZP0 508 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 METTL5Q9NRN9 209 aaKnown RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 KLK14Q9P0G3 267 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 RAB21Q9UL25 225 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 ASAP2O43150 1006 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 C6orf222P0C671 652 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 ITIH2P19823 946 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 ZNF157P51786 506 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 AADACL2Q6P093 401 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 DLK2Q6UY11 383 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 DNERQ8NFT8 737 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 ASAP3Q8TDY4 903 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 TNPO2O14787 897 aaKnown RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 STAMBPO95630 424 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 CCNE2O96020 404 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 MAPTP10636 758 aaKnown RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 PRKCIP41743 596 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 IRAK1P51617 712 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 EIF3EP60228 445 aaKnown RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 MAP1SQ66K74 1059 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 SPDYE16A6NNV3 312 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 RALAP11233 206 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 METTL7BQ6UX53 244 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 CREG2Q8IUH2 290 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 FBXO25Q8TCJ0 367 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 CARD9Q9H257 536 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 I3L4J1 428 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 MOCS2O96007 188 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 FAM153BP0C7A2 387 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 GNAT1P11488 350 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 NME3Q13232 169 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 LAMC2Q13753 1193 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 SLC29A2Q14542 456 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 AMHR2Q16671 573 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 FAM153CQ494X1 144 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 TEX2Q8IWB9 1127 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 GPC2Q8N158 579 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 FAM153AQ9UHL3 310 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 NALCNQ8IZF0 1738 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 CYP2C9P11712 490 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 KRT10P13645 584 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 INSRRP14616 1297 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 HSD17B4P51659 736 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 EMC1Q8N766 993 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 LRRC15Q8TF66 581 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 SALL4Q9UJQ4 1053 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 CXCL11O14625 94 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 ERVK-9P63128 1117 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 AFG1LQ8WV93 481 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 GPATCH2LQ9NWQ4 482 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 MYO10Q9HD67 2058 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 A0A0A6YYK5 440 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 SPAG7O75391 227 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 RNASELQ05823 741 aaKnown RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 HGSNATQ68CP4 663 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 CPB2Q96IY4 423 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 CNOT10Q9H9A5 744 aaKnown RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 PRMT7Q9NVM4 692 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 CPA4Q9UI42 421 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 CREB3O43889 395 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 CST8O60676 142 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 PROSCO94903 275 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 LCP1P13796 627 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 GTF2BQ00403 316 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 PPATQ06203 517 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 LAMTOR4Q0VGL1 99 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 PSMD6Q15008 389 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 CLMNQ96JQ2 1002 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 ASCC2Q9H1I8 757 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-201ENST00000314191 GZMAP12544 262 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 RAP1GAPP47736 663 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 CDH8P55286 799 aa6.55□□□□□ -1.36
PRKDC-201ENST00000314191 PHF20L1A8MW92 1017 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 GLRA2P23416 452 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 ARL4CP56559 192 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 NT5DC3Q86UY8 548 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.54□□□□□ -1.364e-7■■■□□ 15.8
PRKDC-201ENST00000314191 KLF6Q99612 283 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 KLC2Q9H0B6 622 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 DDX56Q9NY93 547 aaKnown RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 WRAP73Q9P2S5 460 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 GGT7Q9UJ14 662 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 MAP2P11137 1827 aaKnown RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 SUN1O94901 812 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 VTNP04004 478 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 PTGER2P43116 358 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 MAPK7Q13164 816 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 CCHCR1Q8TD31 782 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 KLHL29Q96CT2 875 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 LRFN2Q9ULH4 789 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 GMNCA6NCL1 334 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 NPTXRO95502 500 aa6.54□□□□□ -1.36
PRKDC-201ENST00000314191 HIBCHQ6NVY1 386 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-201ENST00000314191 RCOR2Q8IZ40 523 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms