RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 TUSC3Q13454 348 aa20.15■□□□□ 0.82
CDK4-202ENST00000312990 TRPC3Q13507 836 aa20.15■□□□□ 0.82
CDK4-202ENST00000312990 RASIP1Q5U651 963 aa20.15■□□□□ 0.82
CDK4-202ENST00000312990 SPOPLQ6IQ16 392 aa20.15■□□□□ 0.82
CDK4-202ENST00000312990 FAM117BQ6P1L5 589 aa20.15■□□□□ 0.82
CDK4-202ENST00000312990 ZNF689Q96CS4 500 aaPredicted RBP20.15■□□□□ 0.82
CDK4-202ENST00000312990 PCMTD1Q96MG8 357 aaPredicted RBP20.15■□□□□ 0.82
CDK4-202ENST00000312990 TTYH3Q9C0H2 523 aa20.15■□□□□ 0.82
CDK4-202ENST00000312990 GANQ9H2C0 597 aa20.15■□□□□ 0.82
CDK4-202ENST00000312990 APOBEC3GQ9HC16 384 aaKnown RBP20.15■□□□□ 0.82
CDK4-202ENST00000312990 HCSTQ9UBK5 93 aa20.15■□□□□ 0.82
CDK4-202ENST00000312990 AGAP1Q9UPQ3 857 aa20.15■□□□□ 0.82
CDK4-202ENST00000312990 CHD7Q9P2D1 2997 aa20.14■□□□□ 0.82
CDK4-202ENST00000312990 CLCNKBP51801 687 aa20.14■□□□□ 0.81
CDK4-202ENST00000312990 NOP14P78316 857 aaKnown RBP20.14■□□□□ 0.81
CDK4-202ENST00000312990 RBP5P82980 135 aa20.14■□□□□ 0.81
CDK4-202ENST00000312990 LRMPQ12912 555 aa20.14■□□□□ 0.81
CDK4-202ENST00000312990 KLHDC7AQ5VTJ3 777 aa20.14■□□□□ 0.81
CDK4-202ENST00000312990 PHLDB3Q6NSJ2 640 aa20.14■□□□□ 0.81
CDK4-202ENST00000312990 RSPH1Q8WYR4 309 aa20.14■□□□□ 0.81
CDK4-202ENST00000312990 APEX2Q9UBZ4 518 aa20.14■□□□□ 0.81
CDK4-202ENST00000312990 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.14■□□□□ 0.81
CDK4-202ENST00000312990 CHD9Q3L8U1 2897 aa20.14■□□□□ 0.81
CDK4-202ENST00000312990 IGFBP6P24592 240 aaPredicted RBP20.13■□□□□ 0.81
CDK4-202ENST00000312990 UPP1Q16831 310 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 PAN2Q504Q3 1202 aaKnown RBP20.13■□□□□ 0.81
CDK4-202ENST00000312990 C9orf50Q5SZB4 431 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 GJB7Q6PEY0 223 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 ARHGEF19Q8IW93 802 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 COLGALT2Q8IYK4 626 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 TATDN2Q93075 761 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 PDLIM2Q96JY6 352 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 MRPL9Q9BYD2 267 aaKnown RBP20.13■□□□□ 0.81
CDK4-202ENST00000312990 AJAP1Q9UKB5 411 aaPredicted RBP20.13■□□□□ 0.81
CDK4-202ENST00000312990 NUB1Q9Y5A7 615 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 ZC3H11AO75152 810 aaKnown RBP eCLIP20.13■□□□□ 0.81
CDK4-202ENST00000312990 GJB5O95377 273 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 GYPCP04921 128 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 UCHL3P15374 230 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 TRIM21P19474 475 aaKnown RBP20.13■□□□□ 0.81
CDK4-202ENST00000312990 RGS19P49795 217 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 RNASELQ05823 741 aaKnown RBP20.13■□□□□ 0.81
CDK4-202ENST00000312990 TBX2Q13207 712 aaPredicted RBP20.13■□□□□ 0.81
CDK4-202ENST00000312990 SGSM1Q2NKQ1 1148 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 ZNF699Q32M78 642 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 LRRC43Q8N309 656 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 LRRC52Q8N7C0 313 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 SPC24Q8NBT2 197 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 C3orf58Q8NDZ4 430 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 NEK11Q8NG66 645 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 ANP32BQ92688 251 aaKnown RBP20.13■□□□□ 0.81
CDK4-202ENST00000312990 RABGGTAQ92696 567 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 HPDLQ96IR7 371 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 NRDE2Q9H7Z3 1164 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 VRTNQ9H8Y1 702 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 DNAJB4Q9UDY4 337 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 FHOD1Q9Y613 1164 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 SLC4A7Q9Y6M7 1214 aa20.13■□□□□ 0.81
CDK4-202ENST00000312990 RNF225M0QZC1 329 aaPredicted RBP20.12■□□□□ 0.81
CDK4-202ENST00000312990 PODXLO00592 558 aa20.12■□□□□ 0.81
CDK4-202ENST00000312990 STAU1O95793 577 aaKnown RBP20.12■□□□□ 0.81
CDK4-202ENST00000312990 ATICP31939 592 aa20.12■□□□□ 0.81
CDK4-202ENST00000312990 FIGNQ5HY92 759 aa20.12■□□□□ 0.81
CDK4-202ENST00000312990 NT5C1BQ96P26 610 aa20.12■□□□□ 0.81
CDK4-202ENST00000312990 NAA15Q9BXJ9 866 aaKnown RBP20.12■□□□□ 0.81
CDK4-202ENST00000312990 IMPG2Q9BZV3 1241 aa20.12■□□□□ 0.81
CDK4-202ENST00000312990 H0YGN5 161 aa20.11■□□□□ 0.81
CDK4-202ENST00000312990 SPTLC1O15269 473 aa20.11■□□□□ 0.81
CDK4-202ENST00000312990 RPL9P32969 192 aaKnown RBP20.11■□□□□ 0.81
CDK4-202ENST00000312990 HTRA4P83105 476 aaPredicted RBP20.11■□□□□ 0.81
CDK4-202ENST00000312990 WDR44Q5JSH3 913 aa20.11■□□□□ 0.81
CDK4-202ENST00000312990 IQCEQ6IPM2 695 aa20.11■□□□□ 0.81
CDK4-202ENST00000312990 DRC7Q8IY82 874 aa20.11■□□□□ 0.81
CDK4-202ENST00000312990 TAF4BQ92750 862 aa20.11■□□□□ 0.81
CDK4-202ENST00000312990 KAT5Q92993 513 aa20.11■□□□□ 0.81
CDK4-202ENST00000312990 UROC1Q96N76 676 aa20.11■□□□□ 0.81
CDK4-202ENST00000312990 SLC9A7Q96T83 725 aa20.11■□□□□ 0.81
CDK4-202ENST00000312990 FBXL5Q9UKA1 691 aa20.11■□□□□ 0.81
CDK4-202ENST00000312990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.11■□□□□ 0.81
CDK4-202ENST00000312990 F8W810 466 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 LILRA4P59901 499 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 POLR2FP61218 127 aaKnown RBP20.1■□□□□ 0.81
CDK4-202ENST00000312990 WDR72Q3MJ13 1102 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 CD300LGQ6UXG3 332 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 RRAGAQ7L523 313 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 PPM1KQ8N3J5 372 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 ZNF560Q96MR9 790 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 FAM193BQ96PV7 902 aaPredicted RBP20.1■□□□□ 0.81
CDK4-202ENST00000312990 ARID3AQ99856 593 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 GDF15Q99988 308 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 NUP58Q9BVL2 599 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 MTIF3Q9H2K0 278 aaKnown RBP20.1■□□□□ 0.81
CDK4-202ENST00000312990 CWH43Q9H720 699 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 CEP72Q9P209 647 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 R3HCC1Q9Y3T6 440 aaKnown RBP20.1■□□□□ 0.81
CDK4-202ENST00000312990 CDH23Q9H251 3354 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 ATP2A2P16615 1042 aaKnown RBP20.1■□□□□ 0.81
CDK4-202ENST00000312990 ASPAP45381 313 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 TAF6P49848 677 aa20.1■□□□□ 0.81
CDK4-202ENST00000312990 FXR1P51114 621 aaKnown RBP eCLIP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms