RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 C11orf70Q9BRQ4 267 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 VTA1Q9NP79 307 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 KNL1Q8NG31 2342 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 ARMC6Q6NXE6 501 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 C18orf25Q96B23 403 aaPredicted RBP14.02□□□□□ -0.17
TRIM56-201ENST00000306085 RBBP8Q99708 897 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 PALD1Q9ULE6 856 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 USP15Q9Y4E8 981 aaPredicted RBP14.02□□□□□ -0.17
TRIM56-201ENST00000306085 GNA15P30679 374 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 TYW3Q6IPR3 259 aaKnown RBP14.02□□□□□ -0.17
TRIM56-201ENST00000306085 CLDN3O15551 220 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 ALDH1A2O94788 518 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 CHN1P15882 459 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 PSMC5P62195 406 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 L3MBTL3Q96JM7 780 aaPredicted RBP14.02□□□□□ -0.17
TRIM56-201ENST00000306085 ABHD10Q9NUJ1 306 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 TPST1O60507 370 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 SLC39A14Q15043 492 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 GALNTL6Q49A17 601 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 TMEM35BQ8NCS4 154 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 NMD3Q96D46 503 aaKnown RBP14.01□□□□□ -0.17
TRIM56-201ENST00000306085 GPC3P51654 580 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 C1DQ13901 141 aaKnown RBP14.01□□□□□ -0.17
TRIM56-201ENST00000306085 PCSK7Q16549 785 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 GPATCH4Q5T3I0 446 aaKnown RBP14.01□□□□□ -0.17
TRIM56-201ENST00000306085 UBXN6Q9BZV1 441 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 DAPK2Q9UIK4 370 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 PDIA3P30101 505 aaKnown RBP14.01□□□□□ -0.17
TRIM56-201ENST00000306085 KRT20P35900 424 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 NPATQ14207 1427 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 GSTA3Q16772 222 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 CACTIN-AS1Q8N1I8 211 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 VPS37AQ8NEZ2 397 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 WNT8AQ9H1J5 351 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 GMEB1Q9Y692 573 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 ADGRL1O94910 1474 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 ZBTB7BO15156 539 aaPredicted RBP14.01□□□□□ -0.17
TRIM56-201ENST00000306085 EIF3EP60228 445 aaKnown RBP14.01□□□□□ -0.17
TRIM56-201ENST00000306085 SH3TC2Q8TF17 1288 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 MYO3BQ8WXR4 1341 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 ACTR2P61160 394 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 TRIM65Q6PJ69 517 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 MLPHQ9BV36 600 aaPredicted RBP14.01□□□□□ -0.17
TRIM56-201ENST00000306085 YWHAQP27348 245 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 GCLMP48507 274 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 ERP27Q96DN0 273 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 CEP72Q9P209 647 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 ZMYM4Q5VZL5 1548 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 IGF1RP08069 1367 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 CCDC130P13994 396 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 NRG3P56975 720 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 P3H1Q32P28 736 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 THUMPD3Q9BV44 507 aaKnown RBP14.01□□□□□ -0.17
TRIM56-201ENST00000306085 ING3Q9NXR8 418 aa14.01□□□□□ -0.17
TRIM56-201ENST00000306085 ZBTB22O15209 634 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 TPI1P60174 286 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 NDUFAF6Q330K2 333 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 PAGE5Q96GU1 130 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 TRIM51Q9BSJ1 452 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 TM6SF1Q9BZW5 370 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 CYLDQ9NQC7 956 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 A0A087X0T9 212 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 NOS3P29474 1203 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 KPNB1Q14974 876 aaKnown RBP14□□□□□ -0.17
TRIM56-201ENST00000306085 ZCWPW2Q504Y3 356 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 SYDE2Q5VT97 1194 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 ZBTB38Q8NAP3 1195 aaPredicted RBP14□□□□□ -0.17
TRIM56-201ENST00000306085 CEP44Q9C0F1 390 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 RPS6KB2Q9UBS0 482 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 GRIN2BQ13224 1484 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 P4HA2O15460 535 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 PTPN12Q05209 780 aaKnown RBP14□□□□□ -0.17
TRIM56-201ENST00000306085 TWF1Q12792 350 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 COA7Q96BR5 231 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 SLC9A7Q96T83 725 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 RANBP17Q9H2T7 1088 aaKnown RBP14□□□□□ -0.17
TRIM56-201ENST00000306085 ZFYVE9O95405 1425 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 GRID2IPA4D2P6 1211 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 FAM47E-STBD1D6RA91 191 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 IGF2BP3O00425 579 aaKnown RBP eCLIP14□□□□□ -0.17
TRIM56-201ENST00000306085 NUDT2P50583 147 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 RASGRF1Q13972 1273 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 PDP2Q9P2J9 529 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 IDI1Q13907 227 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 ZNF284Q2VY69 593 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 CENPLQ8N0S6 344 aaPredicted RBP14□□□□□ -0.17
TRIM56-201ENST00000306085 ATPAF2Q8N5M1 289 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 NINQ8N4C6 2090 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 EIF2B5Q13144 721 aaKnown RBP14□□□□□ -0.17
TRIM56-201ENST00000306085 SNX30Q5VWJ9 437 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 RMI1Q9H9A7 625 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 KLHL2O95198 593 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 AKR1B1P15121 316 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 RALGDSQ12967 914 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 TRPM8Q7Z2W7 1104 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 MTA3Q9BTC8 594 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 AREL1O15033 823 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 A1BGP04217 495 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 MAGEA10P43363 369 aaPredicted RBP14□□□□□ -0.17
TRIM56-201ENST00000306085 KIAA0408Q6ZU52 694 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms