RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ERVK-5Q9HDB9 667 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 CHST12Q9NRB3 414 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 DPP3Q9NY33 737 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 CNTN3Q9P232 1028 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 NAGPAQ9UK23 515 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 ITGA11Q9UKX5 1188 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 PADI3Q9ULW8 664 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 GUCA1BQ9UMX6 200 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 DDX3XO00571 662 aaKnown RBP eCLIP13.94□□□□□ -0.18
CCDC7-202ENST00000302316 ZSCAN20P17040 1043 aaPredicted RBP13.94□□□□□ -0.18
CCDC7-202ENST00000302316 GLRA4Q5JXX5 417 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 ALKBH5Q6P6C2 394 aaKnown RBP13.94□□□□□ -0.18
CCDC7-202ENST00000302316 SCARA5Q6ZMJ2 495 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 SLC47A2Q86VL8 602 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 TAF4BQ92750 862 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 ZMAT2Q96NC0 199 aaKnown RBP13.94□□□□□ -0.18
CCDC7-202ENST00000302316 AGPAT1Q99943 283 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 SEZ6LQ9BYH1 1024 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 IRX2Q9BZI1 471 aaPredicted RBP13.94□□□□□ -0.18
CCDC7-202ENST00000302316 FAM105AQ9NUU6 356 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 KLK14Q9P0G3 267 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 DNAI1Q9UI46 699 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 PCDHB4Q9Y5E5 795 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 PCDHB2Q9Y5E7 798 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 ACO1P21399 889 aaKnown RBP13.93□□□□□ -0.18
CCDC7-202ENST00000302316 TNFAIP3P21580 790 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 CTU1Q7Z7A3 348 aaKnown RBP13.93□□□□□ -0.18
CCDC7-202ENST00000302316 NOP9Q86U38 636 aaKnown RBP13.93□□□□□ -0.18
CCDC7-202ENST00000302316 RPUSD2Q8IZ73 545 aaKnown RBP13.93□□□□□ -0.18
CCDC7-202ENST00000302316 BEST2Q8NFU1 509 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 KIF18AQ8NI77 898 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 OLIG1Q8TAK6 271 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 U2AF1L4Q8WU68 220 aaKnown RBP13.93□□□□□ -0.18
CCDC7-202ENST00000302316 ACP6Q9NPH0 428 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 NXF1Q9UBU9 619 aaKnown RBP13.93□□□□□ -0.18
CCDC7-202ENST00000302316 NOCTQ9UK39 431 aaKnown RBP13.93□□□□□ -0.18
CCDC7-202ENST00000302316 AGAP1Q9UPQ3 857 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 CYP11B1P15538 503 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 ATICP31939 592 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 RBP5P82980 135 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 NAB2Q15742 525 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 ZNF667Q5HYK9 610 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 C10orf76Q5T2E6 689 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 TAF3Q5VWG9 929 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 TMEM270Q6UE05 265 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 ALKAL1Q6UXT8 129 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 HACE1Q8IYU2 909 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 USP38Q8NB14 1042 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 CXorf38Q8TB03 319 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 TUBGCP4Q9UGJ1 667 aa13.93□□□□□ -0.18
CCDC7-202ENST00000302316 HSPA8P11142 646 aaKnown RBP13.92□□□□□ -0.18
CCDC7-202ENST00000302316 CD58P19256 250 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 ASPAP45381 313 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 CDK7P50613 346 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 WDR72Q3MJ13 1102 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 ZNF569Q5MCW4 686 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 FAM126BQ8IXS8 530 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 SLC30A5Q8TAD4 765 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 CAGE1Q8TC20 777 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 HPDLQ96IR7 371 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 PACSIN1Q9BY11 444 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 RNF19AQ9NV58 838 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 UBQLN1Q9UMX0 589 aaKnown RBP13.92□□□□□ -0.18
CCDC7-202ENST00000302316 NENFQ9UMX5 172 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 POLIQ9UNA4 740 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 SQORQ9Y6N5 450 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 DUSP10Q9Y6W6 482 aa13.92□□□□□ -0.18
CCDC7-202ENST00000302316 SMIM28A0A1B0GU29 152 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 MACROD2A1Z1Q3 448 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 PJA2O43164 708 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 BPIFB4P59827 614 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 ZBTB6Q15916 424 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 FBXO46Q6PJ61 603 aaPredicted RBP13.91□□□□□ -0.18
CCDC7-202ENST00000302316 TRAF7Q6Q0C0 670 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 UBR7Q8N806 425 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 RBBP8NLQ8NC74 664 aaPredicted RBP13.91□□□□□ -0.18
CCDC7-202ENST00000302316 SECISBP2LQ93073 1101 aaKnown RBP13.91□□□□□ -0.18
CCDC7-202ENST00000302316 C18orf25Q96B23 403 aaPredicted RBP13.91□□□□□ -0.18
CCDC7-202ENST00000302316 WDR24Q96S15 920 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 MYO1AQ9UBC5 1043 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 TMCO5BA8MYB1 307 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 XPOTO43592 962 aaKnown RBP13.91□□□□□ -0.18
CCDC7-202ENST00000302316 MGEA5O60502 916 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 WEE2P0C1S8 567 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 ITGA4P13612 1032 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 KCNE1P15382 129 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 RAB27AP51159 221 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 YWHAEP62258 255 aaKnown RBP13.91□□□□□ -0.18
CCDC7-202ENST00000302316 CDR2Q01850 454 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 XKR4Q5GH76 650 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 DNAAF5Q86Y56 855 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 PALB2Q86YC2 1186 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 ZNF333Q96JL9 665 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 TSPAN18Q96SJ8 248 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 VRTNQ9H8Y1 702 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 CISHQ9NSE2 258 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 PAXBP1Q9Y5B6 917 aa13.91□□□□□ -0.18
CCDC7-202ENST00000302316 ATP8B3O60423 1300 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 TLR3O15455 904 aaKnown RBP13.9□□□□□ -0.18
CCDC7-202ENST00000302316 CALCAP01258 141 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms