RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 MT-ND3P03897 115 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 YARSP54577 528 aaKnown RBP14.88□□□□□ -0.03
SDC2-201ENST00000302190 HADHQ16836 314 aaKnown RBP14.88□□□□□ -0.03
SDC2-201ENST00000302190 RHOT1Q8IXI2 618 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 MSL3Q8N5Y2 521 aaKnown RBP14.88□□□□□ -0.03
SDC2-201ENST00000302190 PRELID2Q8N945 189 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 DTX3LQ8TDB6 740 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 DNAJC18Q9H819 358 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 NPHS2Q9NP85 383 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 MARCOQ9UEW3 520 aaPredicted RBP14.88□□□□□ -0.03
SDC2-201ENST00000302190 PFASO15067 1338 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 ZSCAN5DPP0CG00 497 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 GPR162Q16538 588 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 PREPLQ4J6C6 727 aaPredicted RBP14.88□□□□□ -0.03
SDC2-201ENST00000302190 RHPN2Q8IUC4 686 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 ATL2Q8NHH9 583 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 PRCCQ92733 491 aaPredicted RBP14.88□□□□□ -0.03
SDC2-201ENST00000302190 RPAP3Q9H6T3 665 aaPredicted RBP14.88□□□□□ -0.03
SDC2-201ENST00000302190 KIF9Q9HAQ2 790 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 NOD2Q9HC29 1040 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 TBC1D22BQ9NU19 505 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 ZNF70Q9UC06 446 aaPredicted RBP14.88□□□□□ -0.03
SDC2-201ENST00000302190 SUGT1Q9Y2Z0 365 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 ENO4A6NNW6 628 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 ANKRD63C9JTQ0 380 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 WNT10BO00744 389 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 HLA-DRAP01903 254 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 PSMC4P43686 418 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 NPTX2P47972 431 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 RARRES1P49788 294 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 CCNHP51946 323 aaPredicted RBP14.88□□□□□ -0.03
SDC2-201ENST00000302190 GABPAQ06546 454 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 ATP13A4Q4VNC1 1196 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 SULF1Q8IWU6 871 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 GPD1LQ8N335 351 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 ZNF408Q9H9D4 720 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 A1CFQ9NQ94 594 aaKnown RBP14.88□□□□□ -0.03
SDC2-201ENST00000302190 RNF181Q9P0P0 153 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 FEM1BQ9UK73 627 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 COG5Q9UP83 839 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 GRIN2DO15399 1336 aa14.88□□□□□ -0.03
SDC2-201ENST00000302190 I3L4J1 428 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 CSDE1O75534 798 aaKnown RBP14.87□□□□□ -0.03
SDC2-201ENST00000302190 CREB1P16220 341 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 TARSP26639 723 aaKnown RBP14.87□□□□□ -0.03
SDC2-201ENST00000302190 SPARCL1Q14515 664 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 RRP1BQ14684 758 aaKnown RBP14.87□□□□□ -0.03
SDC2-201ENST00000302190 CENPUQ71F23 418 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 PDCD7Q8N8D1 485 aaKnown RBP14.87□□□□□ -0.03
SDC2-201ENST00000302190 ATG4CQ96DT6 458 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 WRNIP1Q96S55 665 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 TRABDQ9H4I3 376 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 NEU2Q9Y3R4 380 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 PSAPP07602 524 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 PHBP35232 272 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 OR6B2Q6IFH4 312 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 GADL1Q6ZQY3 521 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 LMNTD2Q8IXW0 634 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 SAE1Q9UBE0 346 aaPredicted RBP14.87□□□□□ -0.03
SDC2-201ENST00000302190 HERC5Q9UII4 1024 aaKnown RBP14.87□□□□□ -0.03
SDC2-201ENST00000302190 CNOT7Q9UIV1 285 aaKnown RBP14.87□□□□□ -0.03
SDC2-201ENST00000302190 TPX2Q9ULW0 747 aaKnown RBP14.87□□□□□ -0.03
SDC2-201ENST00000302190 HOXA7P31268 230 aaPredicted RBP14.87□□□□□ -0.03
SDC2-201ENST00000302190 TKFCQ3LXA3 575 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 Q4G0T1 1027 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 ANKRD20A8PQ5CZ79 823 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 PPM1NQ8N819 430 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 FAM129AQ9BZQ8 928 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 YIPF3Q9GZM5 350 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 NOP53Q9NZM5 478 aaKnown RBP14.87□□□□□ -0.03
SDC2-201ENST00000302190 TBX20Q9UMR3 447 aa14.87□□□□□ -0.03
SDC2-201ENST00000302190 TNNC2P02585 160 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 NR3C2P08235 984 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 CPA2P48052 419 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 RASSF2P50749 326 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 CFAP157Q5JU67 520 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 PDIK1LQ8N165 341 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 NSMCE1Q8WV22 266 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.86□□□□□ -0.037e-9■■■■■ 72.6
SDC2-201ENST00000302190 LTBP1Q14766 1721 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 E2F8A0AVK6 867 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 TJP3O95049 919 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 MAGEA4P43358 317 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 TSNAXIP1Q2TAA8 658 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 FAXCQ5TGI0 409 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 HOMEZQ8IX15 550 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 RBBP8NLQ8NC74 664 aaPredicted RBP14.86□□□□□ -0.03
SDC2-201ENST00000302190 BBOF1Q8ND07 529 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 FAM149B1Q96BN6 582 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 STAMBPL1Q96FJ0 436 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 RAB3IPQ96QF0 476 aaPredicted RBP14.86□□□□□ -0.03
SDC2-201ENST00000302190 ATP6V0A4Q9HBG4 840 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 TRIM33Q9UPN9 1127 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 SPDYE2BA6NHP3 402 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 KIAA0391O15091 583 aaKnown RBP14.86□□□□□ -0.03
SDC2-201ENST00000302190 RIPK2O43353 540 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 SPDYE6P0CI01 402 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 CCND2P30279 289 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 PRKCIP41743 596 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 ZBTB8OSQ8IWT0 167 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms