RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 PADI6Q6TGC4 694 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 CNDP1Q96KN2 507 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 MMADHCQ9H3L0 296 aaPredicted RBP11.82□□□□□ -0.52
GCN1-201ENST00000300648 LZTS1Q9Y250 596 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 LOC102724159A0A0B4J2E5 919 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 USP17L3A6NCW0 530 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 USP17L4A6NCW7 530 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 CRKLP46109 303 aaKnown RBP11.82□□□□□ -0.52
GCN1-201ENST00000300648 PWP2Q15269 919 aaKnown RBP11.82□□□□□ -0.52
GCN1-201ENST00000300648 FAM98CQ17RN3 349 aaKnown RBP11.82□□□□□ -0.52
GCN1-201ENST00000300648 LRRC8DQ7L1W4 858 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 USP17L1Q7RTZ2 530 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 MMGT1Q8N4V1 131 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 APPL2Q8NEU8 664 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 OR6P1Q8NGX9 317 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 DCUN1D1Q96GG9 259 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 RSAD1Q9HA92 442 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 TULP4Q9NRJ4 1543 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 TLR2O60603 784 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 SRGAP2O75044 1071 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 APOL4Q9BPW4 351 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 ZSWIM5Q9P217 1185 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 HERC5Q9UII4 1024 aaKnown RBP11.82□□□□□ -0.52
GCN1-201ENST00000300648 TTC26A0AVF1 554 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 DLGAP3O95886 979 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 INAQ16352 499 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 KCTD1Q719H9 257 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 ASIC4Q96FT7 647 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 APOL6Q9BWW8 343 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 CLEC4MQ9H2X3 399 aaPredicted RBP11.82□□□□□ -0.52
GCN1-201ENST00000300648 KPNA4O00629 521 aaPredicted RBP11.82□□□□□ -0.52
GCN1-201ENST00000300648 CALB2P22676 271 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 ANGPT1Q15389 498 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 PKN3Q6P5Z2 889 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 APOBEC3FQ8IUX4 373 aaKnown RBP11.82□□□□□ -0.52
GCN1-201ENST00000300648 GPD1LQ8N335 351 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 ATAD3AQ9NVI7 634 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 USP1O94782 785 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 CDH6P55285 790 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 ITGA1P56199 1179 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 EIF3EP60228 445 aaKnown RBP11.82□□□□□ -0.52
GCN1-201ENST00000300648 BFSP2Q13515 415 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 MAPRE1Q15691 268 aaKnown RBP11.82□□□□□ -0.52
GCN1-201ENST00000300648 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.82□□□□□ -0.52
GCN1-201ENST00000300648 DIS3LQ8TF46 1054 aaKnown RBP11.82□□□□□ -0.52
GCN1-201ENST00000300648 MANSC1Q9H8J5 431 aa11.82□□□□□ -0.52
GCN1-201ENST00000300648 SPDYE5A6NIY4 337 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 NBNO60934 754 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 RALAP11233 206 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 SPDYE7PQ495Y7 208 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 WDR93Q6P2C0 686 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 IL17REQ8NFR9 667 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 RMND5BQ96G75 393 aaPredicted RBP11.81□□□□□ -0.52
GCN1-201ENST00000300648 MAGEB18Q96M61 343 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 CEP44Q9C0F1 390 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 ZFP1Q6P2D0 407 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 BARHL2Q9NY43 387 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 CENPXA8MT69 81 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 PDZK1P1A8MUH7 402 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 TTKP33981 857 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 PDK1Q15118 436 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 ZNF568Q3ZCX4 644 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 PRPF39Q86UA1 669 aaKnown RBP11.81□□□□□ -0.52
GCN1-201ENST00000300648 ORAI2Q96SN7 254 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 KLHL4Q9C0H6 718 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 KRT6BP04259 564 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 TKTP29401 623 aaKnown RBP11.81□□□□□ -0.52
GCN1-201ENST00000300648 KRT6CP48668 564 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 PDAP1Q13442 181 aaKnown RBP11.81□□□□□ -0.52
GCN1-201ENST00000300648 NLRP9Q7RTR0 991 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 SGMS1Q86VZ5 419 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 PTPRN2Q92932 1015 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 PLEKHF1Q96S99 279 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 NEU2Q9Y3R4 380 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 SF3B1O75533 1304 aaKnown RBP eCLIP11.81□□□□□ -0.522e-6■■■■■ 130.1
GCN1-201ENST00000300648 hCG_2014768A0A024R1R8 64 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 M0QYV0 167 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 PSTPIP1O43586 416 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 KLHL41O60662 606 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 TRIM13O60858 407 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 PDE9AO76083 593 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 FAM102AQ5T9C2 384 aaPredicted RBP11.81□□□□□ -0.52
GCN1-201ENST00000300648 CCNI2Q6ZMN8 369 aaPredicted RBP11.81□□□□□ -0.52
GCN1-201ENST00000300648 THTPAQ9BU02 230 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 SPATA16Q9BXB7 569 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 DLGAP2Q9P1A6 1054 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 TM9SF1O15321 606 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 IFNA14P01570 189 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 QARSP47897 775 aaKnown RBP11.81□□□□□ -0.52
GCN1-201ENST00000300648 PEX3P56589 373 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 MTERF2Q49AM1 385 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 CCSER1Q9C0I3 900 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 INTS2Q9H0H0 1204 aaKnown RBP11.81□□□□□ -0.52
GCN1-201ENST00000300648 CARD9Q9H257 536 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 NOD2Q9HC29 1040 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 APEX2Q9UBZ4 518 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 CTCFP49711 727 aaPredicted RBP11.81□□□□□ -0.52
GCN1-201ENST00000300648 SGSM1Q2NKQ1 1148 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 EDC3Q96F86 508 aaKnown RBP11.81□□□□□ -0.52
GCN1-201ENST00000300648 AGPAT1Q99943 283 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms