RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SCFD2Q8WU76 684 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 RUBCNQ92622 972 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 ANKRD36BP1Q96IX9 119 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 AGAP3Q96P47 875 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 KCNMB3Q9NPA1 279 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 UVRAGQ9P2Y5 699 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 ZNF70Q9UC06 446 aaPredicted RBP14.06□□□□□ -0.16
CASC4-201ENST00000299957 FBXO40Q9UH90 709 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 FEM1BQ9UK73 627 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 COG5Q9UP83 839 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 SCINQ9Y6U3 715 aa14.06□□□□□ -0.16
CASC4-201ENST00000299957 AFDNP55196 1824 aaKnown RBP14.05□□□□□ -0.16
CASC4-201ENST00000299957 A6NJR5 290 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 IL1R1P14778 569 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 TM4SF1P30408 202 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 COPS2P61201 443 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 KRT76Q01546 638 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 MAP7D1Q3KQU3 841 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 TKFCQ3LXA3 575 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 MCPH1Q8NEM0 835 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 ATP2A3Q93084 1043 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 MKNK1Q9BUB5 465 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 OSBPL7Q9BZF2 842 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 UBXN6Q9BZV1 441 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.05□□□□□ -0.16
CASC4-201ENST00000299957 ALDH5A1P51649 535 aaPredicted RBP14.05□□□□□ -0.16
CASC4-201ENST00000299957 EIF3EP60228 445 aaKnown RBP14.05□□□□□ -0.16
CASC4-201ENST00000299957 TRMT10CQ7L0Y3 403 aaKnown RBP14.05□□□□□ -0.16
CASC4-201ENST00000299957 KDELC2Q7Z4H8 507 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 SREK1Q8WXA9 508 aaKnown RBP14.05□□□□□ -0.16
CASC4-201ENST00000299957 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 RBM41Q96IZ5 413 aaKnown RBP14.05□□□□□ -0.16
CASC4-201ENST00000299957 FAM111AQ96PZ2 611 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 PCDHB2Q9Y5E7 798 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 EIF3DO15371 548 aaKnown RBP eCLIP14.05□□□□□ -0.16
CASC4-201ENST00000299957 RBP3P10745 1247 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 NQO1P15559 274 aaKnown RBP14.05□□□□□ -0.16
CASC4-201ENST00000299957 ACAD10Q6JQN1 1059 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 C1orf186Q6ZWK4 172 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 TTLL6Q8N841 843 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 JPH1Q9HDC5 661 aaPredicted RBP14.05□□□□□ -0.16
CASC4-201ENST00000299957 GPATCH2LQ9NWQ4 482 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 PHTF1Q9UMS5 762 aa14.05□□□□□ -0.16
CASC4-201ENST00000299957 hCG_2014768A0A024R1R8 64 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 NFX1Q12986 1120 aaKnown RBP14.04□□□□□ -0.16
CASC4-201ENST00000299957 ACCSLQ4AC99 568 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 C1orf146Q5VVC0 180 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 C11orf63Q6NUN7 778 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 OR6B3Q8NGW1 331 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 EPS8L1Q8TE68 723 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 PPP1R13LQ8WUF5 828 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 FAM198AQ9UFP1 575 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 SLC4A7Q9Y6M7 1214 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 NALCNQ8IZF0 1738 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 MRC1P22897 1456 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 GRIN2DO15399 1336 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 DCTN3O75935 186 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 CIITAP33076 1130 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 TMEM62Q0P6H9 643 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 MAPK6Q16659 721 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 NSUN6Q8TEA1 469 aaKnown RBP14.04□□□□□ -0.16
CASC4-201ENST00000299957 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.04□□□□□ -0.169e-7■■■■■ 91.8
CASC4-201ENST00000299957 TMEM8AQ9HCN3 771 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 SPATS2LQ9NUQ6 558 aaKnown RBP14.04□□□□□ -0.16
CASC4-201ENST00000299957 FAM49BQ9NUQ9 324 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 SUGT1Q9Y2Z0 365 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 COL1A1P02452 1464 aaPredicted RBP14.04□□□□□ -0.16
CASC4-201ENST00000299957 RPS6KA5O75582 802 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 ZBTB7AO95365 584 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 ATP6V1G2O95670 118 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 ADRB2P07550 413 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 SOX11P35716 441 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 JAK3P52333 1124 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 PKN2Q16513 984 aaKnown RBP14.04□□□□□ -0.16
CASC4-201ENST00000299957 EML3Q32P44 896 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 MTDHQ86UE4 582 aaKnown RBP14.04□□□□□ -0.16
CASC4-201ENST00000299957 PCDHB18PQ96TA0 734 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 ZNF302Q9NR11 478 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 OLFML3Q9NRN5 406 aa14.04□□□□□ -0.16
CASC4-201ENST00000299957 TTC4O95801 387 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 MROH9Q5TGP6 573 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 PCNX4Q63HM2 1172 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 MAP7D3Q8IWC1 876 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 DEPDC1BQ8WUY9 529 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 NLRP7Q8WX94 980 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 ACAP3Q96P50 834 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 MED10Q9BTT4 135 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 PARVAQ9NVD7 372 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 ARMCX1Q9P291 453 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 KAT6AQ92794 2004 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 KCNN4O15554 427 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 ATP9AO75110 1047 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 SLC4A1P02730 911 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 NT5C2P49902 561 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 ALCAMQ13740 583 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 AUHQ13825 339 aaKnown RBP14.03□□□□□ -0.16
CASC4-201ENST00000299957 STAT4Q14765 748 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 ZCWPW2Q504Y3 356 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 GSDMBQ8TAX9 411 aa14.03□□□□□ -0.16
CASC4-201ENST00000299957 ETNPPLQ8TBG4 499 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms