RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 LIG4P49917 911 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 RPL7AP62424 266 aaKnown RBP25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 ACCSLQ4AC99 568 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 TMC2Q8TDI7 906 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 RMDN2Q96LZ7 410 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 SERPINB12Q96P63 405 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 KIF9Q9HAQ2 790 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 ANKEF1Q9NU02 776 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 BRWD3Q6RI45 1802 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 COL4A5P29400 1685 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 MGRN1O60291 552 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 ATF7P17544 494 aaPredicted RBP25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 KRT76Q01546 638 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 P3H1Q32P28 736 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 TMEM174Q8WUU8 243 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 TGS1Q96RS0 853 aaKnown RBP25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 OSBPL8Q9BZF1 889 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 HAPLN2Q9GZV7 340 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 CCDC134Q9H6E4 229 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 STK38LQ9Y2H1 464 aa25.93■■□□□ 1.74
SPTSSA-201ENST00000298130 STX2P32856 288 aa25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 ZNF394Q53GI3 561 aa25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 BRDTQ58F21 947 aaPredicted RBP25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 SPOCK2Q92563 424 aa25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 TRAIPQ9BWF2 469 aa25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 ECT2Q9H8V3 914 aa25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 WDR46O15213 610 aaKnown RBP25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 NR3C2P08235 984 aa25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 FASTKD3Q14CZ7 662 aaKnown RBP25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 WDR44Q5JSH3 913 aa25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 C10orf88Q9H8K7 445 aa25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 PCDHB2Q9Y5E7 798 aa25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 ZNF541Q9H0D2 1346 aa25.92■■□□□ 1.74
SPTSSA-201ENST00000298130 COL2A1P02458 1487 aaPredicted RBP25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 VNN1O95497 513 aa25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 GCNT1Q02742 428 aa25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 PREPLQ4J6C6 727 aaPredicted RBP25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 RNF146Q9NTX7 359 aa25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 PGAP2Q9UHJ9 254 aa25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 TLR3O15455 904 aaKnown RBP25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 RGS20O76081 388 aa25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 PROSCO94903 275 aa25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 GSCP56915 257 aaPredicted RBP25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 MAMLD1Q13495 774 aa25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 PRAMEF18Q5VWM3 479 aa25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 MON1BQ7L1V2 547 aa25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 SUPT20HQ8NEM7 779 aa25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 MYCBPQ99417 103 aaPredicted RBP25.91■■□□□ 1.74
SPTSSA-201ENST00000298130 POC1B-GALNT4F8VUJ3 575 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 TBC1D12O60347 775 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 BANF1O75531 89 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 NCALDP61601 193 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 PRKCEQ02156 737 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 KLF1Q13351 362 aaPredicted RBP25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 TMEM63BQ5T3F8 832 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 CGB2Q6NT52 195 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 CROCCP2Q86T23 111 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 FITM2Q8N6M3 262 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 ZNF526Q8TF50 670 aaPredicted RBP25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 SLCO2A1Q92959 643 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 STBD1O95210 358 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 GNA15P30679 374 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 TXNRD3NBQ6F5E7 133 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 P3H4Q92791 437 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 RBM15Q96T37 977 aaKnown RBP eCLIP25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 IGF2BP3O00425 579 aaKnown RBP eCLIP25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 ECM2O94769 699 aaPredicted RBP25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 SFNP31947 248 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 SNRPFP62306 86 aaKnown RBP25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 FLAD1Q8NFF5 587 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 OR5B17Q8NGF7 314 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 SAYSD1Q9NPB0 183 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 DNPEPQ9ULA0 475 aa25.9■■□□□ 1.74
SPTSSA-201ENST00000298130 GOLGA8SH3BPF8 625 aa25.89■■□□□ 1.74
SPTSSA-201ENST00000298130 GOLGA8MH3BSY2 632 aa25.89■■□□□ 1.74
SPTSSA-201ENST00000298130 FOXN2P32314 431 aa25.89■■□□□ 1.74
SPTSSA-201ENST00000298130 MIS18BP1Q6P0N0 1132 aa25.89■■□□□ 1.74
SPTSSA-201ENST00000298130 RASA4BC9J798 803 aa25.89■■□□□ 1.73
SPTSSA-201ENST00000298130 RASA4O43374 803 aa25.89■■□□□ 1.73
SPTSSA-201ENST00000298130 PEX10O60683 326 aa25.89■■□□□ 1.73
SPTSSA-201ENST00000298130 OAS1P00973 400 aaKnown RBP25.89■■□□□ 1.73
SPTSSA-201ENST00000298130 MGAT5Q09328 741 aa25.89■■□□□ 1.73
SPTSSA-201ENST00000298130 SPATA21Q7Z572 469 aa25.89■■□□□ 1.73
SPTSSA-201ENST00000298130 CKAP2Q8WWK9 683 aa25.89■■□□□ 1.73
SPTSSA-201ENST00000298130 STAMBPL1Q96FJ0 436 aa25.89■■□□□ 1.73
SPTSSA-201ENST00000298130 NEU2Q9Y3R4 380 aa25.89■■□□□ 1.73
SPTSSA-201ENST00000298130 LRRIQ4A6NIV6 560 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 PLSCR1O15162 318 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 CENPCQ03188 943 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 TEX2Q8IWB9 1127 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 GRK7Q8WTQ7 553 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 NTPCRQ9BSD7 190 aaKnown RBP25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 TARS2Q9BW92 718 aaKnown RBP25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 YY1AP1Q9H869 796 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 CYP26B1Q9NR63 512 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 NUB1Q9Y5A7 615 aa25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 C4BPAP04003 597 aaKnown RBP25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 CYP1A1P04798 512 aaPredicted RBP25.88■■□□□ 1.73
SPTSSA-201ENST00000298130 EDN1P05305 212 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms