RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 FGFR1OP2Q9NVK5 253 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 SFMBT1Q9UHJ3 866 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 SUFUQ9UMX1 484 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 NOVA2Q9UNW9 492 aaKnown RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 CEP170BQ9Y4F5 1589 aaPredicted RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 E2F6O75461 281 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 ITGB3P05106 788 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 CKMP06732 381 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 CKBP12277 381 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 HMOX2P30519 316 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 SNRPFP62306 86 aaKnown RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 PDE1CQ14123 709 aaPredicted RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 DEFB115Q30KQ5 88 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 LCA5Q86VQ0 697 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 UBA3Q8TBC4 463 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 CPA5Q8WXQ8 436 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 FBXO32Q969P5 355 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 PHF20Q9BVI0 1012 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 ASPSCR1Q9BZE9 553 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 FAM96AQ9H5X1 160 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 TRIM33Q9UPN9 1127 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 CXCL11O14625 94 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 LZTS3O60299 673 aaPredicted RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 AVPR1AP37288 418 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 PDIA2Q13087 525 aaKnown RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 BTG3Q14201 252 aaPredicted RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 PHKG1Q16816 387 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 GLRA4Q5JXX5 417 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 MFSD4BQ5TF39 518 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 PDCD7Q8N8D1 485 aaKnown RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 MTBPQ96DY7 904 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 SENP7Q9BQF6 1050 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 TRIM55Q9BYV6 548 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 VPS33BQ9H267 617 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 DSEQ9UL01 958 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 APOBEC2Q9Y235 224 aaKnown RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 CAPN7Q9Y6W3 813 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 MYPNQ86TC9 1320 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 VTNP04004 478 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 SLC2A3P11169 496 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 AKR1A1P14550 325 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 PTRHD1Q6GMV3 140 aaKnown RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 RCOR2Q8IZ40 523 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 CARNMT1Q8N4J0 409 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 SLC25A41Q8N5S1 370 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 ZNF513Q8N8E2 541 aaPredicted RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 SNX31Q8N9S9 440 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 ACER1Q8TDN7 264 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 PDE11AQ9HCR9 933 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 CHST12Q9NRB3 414 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 OLFML3Q9NRN5 406 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 FBXO28Q9NVF7 368 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 TRPM5Q9NZQ8 1165 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 STX18Q9P2W9 335 aaKnown RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 PKP3Q9Y446 797 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 A0A087WUV0 522 aaPredicted RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 CCDC195A0A1B0GUA6 201 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 FAM47DPA6NHR8 397 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 F5H5T6 163 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 GFAPP14136 432 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 SPARCL1Q14515 664 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 PTPAQ15257 358 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 KIZQ2M2Z5 673 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 CSGALNACT1Q8TDX6 532 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 FAM129AQ9BZQ8 928 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 LATS2Q9NRM7 1088 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 PTPRUQ92729 1446 aa7.27□□□□□ -1.24
GAPVD1-202ENST00000297933 ZNF521Q96K83 1311 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 ASS1P00966 412 aaKnown RBP7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 HLA-DRAP01903 254 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 ESRRAP11474 423 aaPredicted RBP7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 ATP1A3P13637 1013 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 VCAM1P19320 739 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 KLRK1P26718 216 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 HERC6Q8IVU3 1022 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 CD302Q8IX05 232 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 ATXN7L3BQ96GX2 97 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 KANSL3Q9P2N6 904 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 APEX2Q9UBZ4 518 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 ABCA6Q8N139 1617 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 LRRC7Q96NW7 1537 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 GRAP2O75791 330 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 ARIH2O95376 493 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 WEE2P0C1S8 567 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 KITP10721 976 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 EEF1B2P24534 225 aaKnown RBP7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 HERVK_113P62684 666 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 RABGAP1LQ5R372 815 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 ZNF280DQ6N043 979 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 ZBED8Q8IZ13 594 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 CLMNQ96JQ2 1002 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 MCEEQ96PE7 176 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 DNAJC7Q99615 494 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 SENP6Q9GZR1 1112 aaPredicted RBP7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 SPATC1LQ9H0A9 340 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 KLHL11Q9NVR0 708 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 KIF17Q9P2E2 1029 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 PPP1R9AQ9ULJ8 1098 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 PNPLA6Q8IY17 1366 aa7.27□□□□□ -1.25
GAPVD1-202ENST00000297933 THP07101 528 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms