RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 NPTXRO95502 500 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 GZMAP12544 262 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 TRPC3Q13507 836 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 JADE1Q6IE81 842 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 TAF4BQ92750 862 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 SEPT11Q9NVA2 429 aaKnown RBP16.67■□□□□ 0.26
LSM6-201ENST00000296581 TAS2R14Q9NYV8 317 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 ASGR1P07306 291 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 BPIFB4P59827 614 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 KCNA10Q16322 511 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 GDF6Q6KF10 455 aaPredicted RBP16.66■□□□□ 0.26
LSM6-201ENST00000296581 NT5DC4Q86YG4 428 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 C1orf127Q8N9H9 656 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 LRRN4CLQ8ND94 238 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 CXorf38Q8TB03 319 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 NIF3L1Q9GZT8 377 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 SIX4Q9UIU6 781 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 C2CD2Q9Y426 696 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 PCDHB2Q9Y5E7 798 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 ANKRD62A6NC57 917 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 MMEP08473 750 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 ZNF677Q86XU0 584 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 FAXDC2Q96IV6 333 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 CELF4Q9BZC1 486 aaKnown RBP16.66■□□□□ 0.26
LSM6-201ENST00000296581 PLEKHA5Q9HAU0 1116 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 DDX20Q9UHI6 824 aaKnown RBP16.66■□□□□ 0.26
LSM6-201ENST00000296581 SAR1BQ9Y6B6 198 aa16.66■□□□□ 0.26
LSM6-201ENST00000296581 TMCO5BA8MYB1 307 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 RTN2O75298 545 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 NAP1L1P55209 391 aaKnown RBP16.65■□□□□ 0.26
LSM6-201ENST00000296581 MRPS6P82932 125 aaKnown RBP16.65■□□□□ 0.26
LSM6-201ENST00000296581 IFI16Q16666 785 aaKnown RBP16.65■□□□□ 0.26
LSM6-201ENST00000296581 WHAMMP3Q1A5X7 153 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 ZNF699Q32M78 642 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 SERINC5Q86VE9 423 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 PCSK9Q8NBP7 692 aaKnown RBP16.65■□□□□ 0.26
LSM6-201ENST00000296581 MNS1Q8NEH6 495 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 RAET1EQ8TD07 263 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 EIF2AQ9BY44 585 aaKnown RBP16.65■□□□□ 0.26
LSM6-201ENST00000296581 BCCIPQ9P287 314 aaKnown RBP eCLIP16.65■□□□□ 0.26
LSM6-201ENST00000296581 PCDHB4Q9Y5E5 795 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 TRIP11Q15643 1979 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 PALMO75781 387 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 PRLRP16471 622 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 ZNF132P52740 706 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 TMEM132DQ14C87 1099 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 RPAINQ86UA6 219 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 CTNNBL1Q8WYA6 563 aaPredicted RBP16.65■□□□□ 0.26
LSM6-201ENST00000296581 RFFLQ8WZ73 363 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 ST7Q9NRC1 585 aa16.65■□□□□ 0.26
LSM6-201ENST00000296581 GRID2IPA4D2P6 1211 aa16.64■□□□□ 0.25
LSM6-201ENST00000296581 TADA3O75528 432 aa16.64■□□□□ 0.25
LSM6-201ENST00000296581 RPLP2P05387 115 aaKnown RBP16.64■□□□□ 0.25
LSM6-201ENST00000296581 YY1P25490 414 aa16.64■□□□□ 0.25
LSM6-201ENST00000296581 TCEAL1Q15170 157 aa16.64■□□□□ 0.25
LSM6-201ENST00000296581 RASSF4Q9H2L5 321 aa16.64■□□□□ 0.25
LSM6-201ENST00000296581 VRTNQ9H8Y1 702 aa16.64■□□□□ 0.25
LSM6-201ENST00000296581 SNX12Q9UMY4 172 aa16.64■□□□□ 0.25
LSM6-201ENST00000296581 DERAQ9Y315 318 aa16.64■□□□□ 0.25
LSM6-201ENST00000296581 TRPV2Q9Y5S1 764 aa16.64■□□□□ 0.25
LSM6-201ENST00000296581 GRIN2DO15399 1336 aa16.64■□□□□ 0.25
LSM6-201ENST00000296581 PDCD11Q14690 1871 aaKnown RBP16.64■□□□□ 0.25
LSM6-201ENST00000296581 FKTNO75072 461 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 FTLP02792 175 aaPredicted RBP16.63■□□□□ 0.25
LSM6-201ENST00000296581 ATICP31939 592 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 ASPAP45381 313 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 TMEM270Q6UE05 265 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 RSPH3Q86UC2 560 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 CEP112Q8N8E3 955 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 RBBP8NLQ8NC74 664 aaPredicted RBP16.63■□□□□ 0.25
LSM6-201ENST00000296581 SNX27Q96L92 541 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 SAGE1Q9NXZ1 904 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 SNTG2Q9NY99 539 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 TSKSQ9UJT2 592 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 PIN4Q9Y237 131 aaKnown RBP16.63■□□□□ 0.25
LSM6-201ENST00000296581 EFCAB8A8MWE9 144 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 ITGB3P05106 788 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 GTF2A1P52655 376 aaPredicted RBP16.63■□□□□ 0.25
LSM6-201ENST00000296581 UBXN11Q5T124 520 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 LRRC57Q8N9N7 239 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 TPCN2Q8NHX9 752 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 WNT8BQ93098 351 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 TLR10Q9BXR5 811 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 THAP2Q9H0W7 228 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 ITGA11Q9UKX5 1188 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 CDY2AQ9Y6F7 541 aa16.63■□□□□ 0.25
LSM6-201ENST00000296581 M0QZ92 97 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 CABYRO75952 493 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 CLSTN1O94985 981 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 KRT19P08727 400 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 ABCB4P21439 1286 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 PRMT2P55345 433 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 ARHGEF6Q15052 776 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 CLEC16AQ2KHT3 1053 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 FAM47CQ5HY64 1035 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 RNF180Q86T96 592 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 FAM228AQ86W67 206 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 ARHGEF26Q96DR7 871 aa16.62■□□□□ 0.25
LSM6-201ENST00000296581 STAU1O95793 577 aaKnown RBP16.62■□□□□ 0.25
LSM6-201ENST00000296581 CALCAP01258 141 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms