RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 MAPK6Q16659 721 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 ZSWIM2Q8NEG5 633 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 WDR60Q8WVS4 1066 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 DHX38Q92620 1227 aaKnown RBP10.88□□□□□ -0.67
LMX1A-201ENST00000294816 FAM136AQ96C01 138 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 PRR11Q96HE9 360 aaPredicted RBP10.88□□□□□ -0.67
LMX1A-201ENST00000294816 BTBD10Q9BSF8 475 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 NYXQ9GZU5 481 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 TMEM117Q9H0C3 514 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 ANKFY1Q9P2R3 1169 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 GTF3C4Q9UKN8 822 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 NEU2Q9Y3R4 380 aa10.88□□□□□ -0.67
LMX1A-201ENST00000294816 COL22A1Q8NFW1 1626 aaPredicted RBP10.88□□□□□ -0.67
LMX1A-201ENST00000294816 PI4K2BG5E9Z4 385 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 MEIS2O14770 477 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 SNHG28P0DPA3 235 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 FMO1Q01740 532 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 SLC5A9Q2M3M2 681 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 SLC45A4Q5BKX6 768 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 CFAP157Q5JU67 520 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 TPTE2Q6XPS3 522 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 CFAP61Q8NHU2 1237 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 SH2D3AQ9BRG2 576 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 CBWD1Q9BRT8 395 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 SMG5Q9UPR3 1016 aaKnown RBP10.87□□□□□ -0.67
LMX1A-201ENST00000294816 ACTL7BQ9Y614 415 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 GSC2O15499 205 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 GSTA2P09210 222 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 FGFR1P11362 822 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 ETS1P14921 441 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 ATF7P17544 494 aaPredicted RBP10.87□□□□□ -0.67
LMX1A-201ENST00000294816 SERPINB3P29508 390 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 NEK3P51956 506 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 ARFIP2P53365 341 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 PLCB3Q01970 1234 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 USP4Q13107 963 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 DDB1Q16531 1140 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 BBOF1Q8ND07 529 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 LMO3Q8TAP4 145 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 ZFAND2BQ8WV99 257 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 NSL1Q96IY1 281 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 GLT8D2Q9H1C3 349 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 CD209Q9NNX6 404 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 ARMCX1Q9P291 453 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 UVRAGQ9P2Y5 699 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 SERPINB13Q9UIV8 391 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 ZBTB12Q9Y330 459 aaPredicted RBP10.87□□□□□ -0.67
LMX1A-201ENST00000294816 NUMBLQ9Y6R0 609 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 ATAD5Q96QE3 1844 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 SPATA31A1Q5TZJ5 1347 aa10.87□□□□□ -0.67
LMX1A-201ENST00000294816 ARHGEF35A5YM69 484 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 TCEA3O75764 348 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 ZWINTO95229 277 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 PGM1P36871 562 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 NR1H3Q13133 447 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 DYNC1I2Q13409 638 aaKnown RBP10.86□□□□□ -0.67
LMX1A-201ENST00000294816 PLEKHG4Q58EX7 1191 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 SLFN13Q68D06 897 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 RINLQ6ZS11 566 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 SYDE1Q6ZW31 735 aaPredicted RBP10.86□□□□□ -0.67
LMX1A-201ENST00000294816 LRRC6Q86X45 466 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 CPA5Q8WXQ8 436 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 FAM20AQ96MK3 541 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 TRAPPC9Q96Q05 1148 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 TRIM55Q9BYV6 548 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 SYNCQ9H7C4 482 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 C6orf229H3BNL8 230 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 C2CD2LO14523 706 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 KCNQ2O43526 872 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 CYP1A2P05177 515 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 GZMAP12544 262 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 RFX1P22670 979 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 GPS1Q13098 491 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 LRRC36Q1X8D7 754 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 SHROOM1Q2M3G4 852 aaPredicted RBP10.86□□□□□ -0.67
LMX1A-201ENST00000294816 C1orf186Q6ZWK4 172 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 DRAXINQ8NBI3 349 aaPredicted RBP10.86□□□□□ -0.67
LMX1A-201ENST00000294816 MAK16Q9BXY0 300 aaKnown RBP10.86□□□□□ -0.67
LMX1A-201ENST00000294816 NOCTQ9UK39 431 aaKnown RBP10.86□□□□□ -0.67
LMX1A-201ENST00000294816 hCG_2014768A0A024R1R8 64 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 CYP3A7-CYP3A51PA0A087WV96 503 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 OPHN1O60890 802 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 POTEJP0CG39 1038 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 CYP11B1P15538 503 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 CYP3A7P24462 503 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 MFAP3P55082 362 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 PDIA2Q13087 525 aaKnown RBP10.86□□□□□ -0.67
LMX1A-201ENST00000294816 PPP2R5CQ13362 524 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 EFTUD2Q15029 972 aaKnown RBP eCLIP10.86□□□□□ -0.67
LMX1A-201ENST00000294816 IZUMO2Q6UXV1 221 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 TTC7BQ86TV6 843 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 RIBC1Q8N443 379 aaPredicted RBP10.86□□□□□ -0.67
LMX1A-201ENST00000294816 GLIS1Q8NBF1 620 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 DENND1AQ8TEH3 1009 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 TTC17Q96AE7 1141 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 LENG9Q96B70 501 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 RBM41Q96IZ5 413 aaKnown RBP10.86□□□□□ -0.67
LMX1A-201ENST00000294816 KREMEN1Q96MU8 473 aa10.86□□□□□ -0.67
LMX1A-201ENST00000294816 ZNF184Q99676 751 aaPredicted RBP10.86□□□□□ -0.67
LMX1A-201ENST00000294816 UBE2OQ9C0C9 1292 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms