RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 ABCD1P33897 745 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 SLC12A3P55017 1021 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 STARD6P59095 220 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
TPM1-202ENST00000288398 MCL1Q07820 350 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 SEZ6Q53EL9 994 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 LARP1BQ659C4 914 aaKnown RBP15.3■□□□□ 0.04
TPM1-202ENST00000288398 CD300LGQ6UXG3 332 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 DSTYKQ6XUX3 929 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 HAUS6Q7Z4H7 955 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 GPBP1Q86WP2 473 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 TCEAL8Q8IYN2 117 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 MYCT1Q8N699 235 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 DOCK8Q8NF50 2099 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 DDX12PQ92771 950 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 OXCT2Q9BYC2 517 aaPredicted RBP15.3■□□□□ 0.04
TPM1-202ENST00000288398 SPATA6Q9NWH7 488 aaPredicted RBP15.3■□□□□ 0.04
TPM1-202ENST00000288398 MAFFQ9ULX9 164 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 UBQLN1Q9UMX0 589 aaKnown RBP15.3■□□□□ 0.04
TPM1-202ENST00000288398 PCDHB8Q9UN66 801 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 MRPS17Q9Y2R5 130 aaKnown RBP15.3■□□□□ 0.04
TPM1-202ENST00000288398 VWA8A3KMH1 1905 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 ABLIM1O14639 778 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 LAMTOR5O43504 91 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 CEBPBP17676 345 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 MAGEA9P43362 315 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 YWHAHQ04917 246 aaPredicted RBP15.29■□□□□ 0.04
TPM1-202ENST00000288398 ADCY1Q08828 1119 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 PLD1Q13393 1074 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 SLC10A6Q3KNW5 377 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 TMEM119Q4V9L6 283 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 LEMD2Q8NC56 503 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 FAM212AQ96EL1 285 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 RPF1Q9H9Y2 349 aaKnown RBP15.29■□□□□ 0.04
TPM1-202ENST00000288398 ZFP14Q9HCL3 533 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 AVENQ9NQS1 362 aaPredicted RBP15.29■□□□□ 0.04
TPM1-202ENST00000288398 ASAH2Q9NR71 780 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 TUBGCP4Q9UGJ1 667 aa15.29■□□□□ 0.04
TPM1-202ENST00000288398 AFF4Q9UHB7 1163 aaKnown RBP15.29■□□□□ 0.04
TPM1-202ENST00000288398 NPHP3-ACAD11A0A0J9YXS1 232 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 FAM170BA6NMN3 283 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 NCKAP1LP55160 1127 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 SPAG1Q07617 926 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 ZBTB41Q5SVQ8 909 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 TPRG1Q6ZUI0 275 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 BRAPQ7Z569 592 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 ELSPBP1Q96BH3 223 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 TSPAN18Q96SJ8 248 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 NELL2Q99435 816 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 REEP2Q9BRK0 252 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 SLITRK6Q9H5Y7 841 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 BRD9Q9H8M2 597 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 PARVGQ9HBI0 331 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 R4GN57 208 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 USP34Q70CQ2 3546 aa15.28■□□□□ 0.04
TPM1-202ENST00000288398 SP9P0CG40 484 aa15.27■□□□□ 0.04
TPM1-202ENST00000288398 MYL4P12829 197 aa15.27■□□□□ 0.04
TPM1-202ENST00000288398 CYP3A5P20815 502 aa15.27■□□□□ 0.04
TPM1-202ENST00000288398 LONP1P36776 959 aaKnown RBP15.27■□□□□ 0.04
TPM1-202ENST00000288398 TWF1Q12792 350 aa15.27■□□□□ 0.04
TPM1-202ENST00000288398 MRPL58Q14197 206 aaKnown RBP15.27■□□□□ 0.04
TPM1-202ENST00000288398 SLC5A9Q2M3M2 681 aa15.27■□□□□ 0.04
TPM1-202ENST00000288398 ZNF852Q6ZMS4 543 aa15.27■□□□□ 0.04
TPM1-202ENST00000288398 CD302Q8IX05 232 aa15.27■□□□□ 0.04
TPM1-202ENST00000288398 BEST2Q8NFU1 509 aa15.27■□□□□ 0.04
TPM1-202ENST00000288398 MSTO1Q9BUK6 570 aa15.27■□□□□ 0.04
TPM1-202ENST00000288398 OSBPL6Q9BZF3 934 aa15.27■□□□□ 0.04
TPM1-202ENST00000288398 TBX20Q9UMR3 447 aa15.27■□□□□ 0.04
TPM1-202ENST00000288398 PTPRZ1P23471 2315 aaPredicted RBP15.27■□□□□ 0.03
TPM1-202ENST00000288398 CITO14578 2027 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 MYH15Q9Y2K3 1946 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 OR6C75A6NL08 312 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 TULP1O00294 542 aaPredicted RBP15.26■□□□□ 0.03
TPM1-202ENST00000288398 OGTO15294 1046 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 TRAK2O60296 914 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 TBC1D4O60343 1298 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 KINO60870 393 aaKnown RBP15.26■□□□□ 0.03
TPM1-202ENST00000288398 MICAL2O94851 1124 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 SEC24AO95486 1093 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 PAX3P23760 479 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 LRPAP1P30533 357 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 ALDH1A3P47895 512 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 EPHB3P54753 998 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 FOXK2Q01167 660 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 ARMCX5Q6P1M9 558 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 YAF2Q8IY57 180 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 KRI1Q8N9T8 703 aaKnown RBP15.26■□□□□ 0.03
TPM1-202ENST00000288398 DNASE1L2Q92874 299 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 TRMT61BQ9BVS5 477 aaKnown RBP15.26■□□□□ 0.03
TPM1-202ENST00000288398 LTB4R2Q9NPC1 389 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 DLGAP2Q9P1A6 1054 aa15.26■□□□□ 0.03
TPM1-202ENST00000288398 TRIP11Q15643 1979 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 TTC26A0AVF1 554 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 VPS37CA5D8V6 355 aaPredicted RBP15.25■□□□□ 0.03
TPM1-202ENST00000288398 LACTBL1A8MY62 500 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 M0QZQ0 153 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 MAN2B1O00754 1011 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 LRRN2O75325 713 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 ODC1P11926 461 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 PLCG1P19174 1290 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms