RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 SLC4A7Q9Y6M7 1214 aa23.5■■□□□ 1.35
PDLIM3-203ENST00000284771 XPOTO43592 962 aaKnown RBP23.49■■□□□ 1.35
PDLIM3-203ENST00000284771 NOL4O94818 638 aa23.49■■□□□ 1.35
PDLIM3-203ENST00000284771 PIK3CAP42336 1068 aa23.49■■□□□ 1.35
PDLIM3-203ENST00000284771 PHLDB3Q6NSJ2 640 aa23.49■■□□□ 1.35
PDLIM3-203ENST00000284771 C3orf58Q8NDZ4 430 aa23.49■■□□□ 1.35
PDLIM3-203ENST00000284771 INTS2Q9H0H0 1204 aaKnown RBP23.49■■□□□ 1.35
PDLIM3-203ENST00000284771 NRDE2Q9H7Z3 1164 aa23.49■■□□□ 1.35
PDLIM3-203ENST00000284771 APOBEC3GQ9HC16 384 aaKnown RBP23.49■■□□□ 1.35
PDLIM3-203ENST00000284771 ASS1P00966 412 aaKnown RBP23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 TPM3P06753 285 aa23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 CETN1Q12798 172 aa23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 LRMPQ12912 555 aa23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 UPP1Q16831 310 aa23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 TATDN2Q93075 761 aa23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 F8W810 466 aa23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 RBP5P82980 135 aa23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 HTRA4P83105 476 aaPredicted RBP23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 RNASELQ05823 741 aaKnown RBP23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 TRPC3Q13507 836 aa23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 GJB7Q6PEY0 223 aa23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 CD300LGQ6UXG3 332 aa23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 FAM207AQ9NSI2 230 aaPredicted RBP23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 NUB1Q9Y5A7 615 aa23.48■■□□□ 1.35
PDLIM3-203ENST00000284771 SPTLC1O15269 473 aa23.47■■□□□ 1.35
PDLIM3-203ENST00000284771 SGSM1Q2NKQ1 1148 aa23.47■■□□□ 1.35
PDLIM3-203ENST00000284771 HERC6Q8IVU3 1022 aa23.47■■□□□ 1.35
PDLIM3-203ENST00000284771 PHOSPHO2Q8TCD6 241 aa23.47■■□□□ 1.35
PDLIM3-203ENST00000284771 LSM14BQ9BX40 385 aaKnown RBP23.47■■□□□ 1.35
PDLIM3-203ENST00000284771 CWH43Q9H720 699 aa23.47■■□□□ 1.35
PDLIM3-203ENST00000284771 AJAP1Q9UKB5 411 aaPredicted RBP23.47■■□□□ 1.35
PDLIM3-203ENST00000284771 RNF225M0QZC1 329 aaPredicted RBP23.46■■□□□ 1.35
PDLIM3-203ENST00000284771 ATP2A2P16615 1042 aaKnown RBP23.46■■□□□ 1.35
PDLIM3-203ENST00000284771 KLHDC7AQ5VTJ3 777 aa23.46■■□□□ 1.35
PDLIM3-203ENST00000284771 FAM109BQ6ICB4 259 aaPredicted RBP23.46■■□□□ 1.35
PDLIM3-203ENST00000284771 ARHGEF19Q8IW93 802 aa23.46■■□□□ 1.35
PDLIM3-203ENST00000284771 HPDLQ96IR7 371 aa23.46■■□□□ 1.35
PDLIM3-203ENST00000284771 SLC9A7Q96T83 725 aa23.46■■□□□ 1.35
PDLIM3-203ENST00000284771 MRPL9Q9BYD2 267 aaKnown RBP23.46■■□□□ 1.35
PDLIM3-203ENST00000284771 PLCB1Q9NQ66 1216 aa23.46■■□□□ 1.35
PDLIM3-203ENST00000284771 PODXLO00592 558 aa23.45■■□□□ 1.34
PDLIM3-203ENST00000284771 ITGB1P05556 798 aa23.45■■□□□ 1.34
PDLIM3-203ENST00000284771 RPL9P32969 192 aaKnown RBP23.45■■□□□ 1.34
PDLIM3-203ENST00000284771 SPECC1LQ69YQ0 1117 aa23.45■■□□□ 1.34
PDLIM3-203ENST00000284771 LRRC43Q8N309 656 aa23.45■■□□□ 1.34
PDLIM3-203ENST00000284771 RSPH1Q8WYR4 309 aa23.45■■□□□ 1.34
PDLIM3-203ENST00000284771 YME1L1Q96TA2 773 aa23.45■■□□□ 1.34
PDLIM3-203ENST00000284771 TTYH3Q9C0H2 523 aa23.45■■□□□ 1.34
PDLIM3-203ENST00000284771 GANQ9H2C0 597 aa23.45■■□□□ 1.34
PDLIM3-203ENST00000284771 VRTNQ9H8Y1 702 aa23.45■■□□□ 1.34
PDLIM3-203ENST00000284771 ITIH6Q6UXX5 1313 aa23.45■■□□□ 1.34
PDLIM3-203ENST00000284771 ZC3H11AO75152 810 aaKnown RBP eCLIP23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 PBX3P40426 434 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 LILRA4P59901 499 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 NOP14P78316 857 aaKnown RBP23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 RRAGAQ7L523 313 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 LRRC52Q8N7C0 313 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 KAT5Q92993 513 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 RNPC3Q96LT9 517 aaKnown RBP23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 PCMTD1Q96MG8 357 aaPredicted RBP23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 FAM193BQ96PV7 902 aaPredicted RBP23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 UBE2OQ9C0C9 1292 aaKnown RBP23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 APEX2Q9UBZ4 518 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 GRXCR1A8MXD5 290 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 STAU1O95793 577 aaKnown RBP23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 UCHL3P15374 230 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 ATICP31939 592 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 BTG3Q14201 252 aaPredicted RBP23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 ZNF699Q32M78 642 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 WDR72Q3MJ13 1102 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 TMC6Q7Z403 805 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 CMTR2Q8IYT2 770 aaKnown RBP23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 MTIF3Q9H2K0 278 aaKnown RBP23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 FHOD1Q9Y613 1164 aa23.44■■□□□ 1.34
PDLIM3-203ENST00000284771 NRP1O14786 923 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 B3GAT3O94766 335 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 GALTP07902 379 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 LINC00271P0C7V0 271 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 CDC25BP30305 580 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 OR1G1P47890 313 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 WDR44Q5JSH3 913 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 TAF4BQ92750 862 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 DDX27Q96GQ7 796 aaKnown RBP23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 UROC1Q96N76 676 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 ARID3AQ99856 593 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 ZBED2Q9BTP6 218 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 NAA15Q9BXJ9 866 aaKnown RBP23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 POLIQ9UNA4 740 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 INSL6Q9Y581 213 aa23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 MRPL42Q9Y6G3 142 aaKnown RBP23.43■■□□□ 1.34
PDLIM3-203ENST00000284771 LCHNA4D1U4 455 aa23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 NT5C1B-RDH14C9J2C7 533 aa23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 KIF4AO95239 1232 aa23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 GYPCP04921 128 aa23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 SLC11A1P49279 550 aa23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 RABGGTBP53611 331 aa23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 TBX2Q13207 712 aaPredicted RBP23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 IQCEQ6IPM2 695 aa23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 TMEM173Q86WV6 379 aaPredicted RBP23.42■■□□□ 1.34
PDLIM3-203ENST00000284771 HASPINQ8TF76 798 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms