RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 EPCAMP16422 314 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 IGFBP6P24592 240 aaPredicted RBP7.06□□□□□ -1.28
CD44-204ENST00000279452 RPL13P26373 211 aaKnown RBP7.06□□□□□ -1.28
CD44-204ENST00000279452 PRCPP42785 496 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 CASP4P49662 377 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 TAF6P49848 677 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 KCNQ1P51787 676 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 WNT7BP56706 349 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 MRPS5P82675 430 aaKnown RBP7.06□□□□□ -1.28
CD44-204ENST00000279452 DSG1Q02413 1049 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 CYP24A1Q07973 514 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 SV2CQ496J9 727 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 CTXN3Q4LDR2 81 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 C9orf57Q5W0N0 161 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 PDXDC1Q6P996 788 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.06□□□□□ -1.28
CD44-204ENST00000279452 SPATA31D4Q6ZUB0 917 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 PPFIBP1Q86W92 1011 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 PALB2Q86YC2 1186 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 NT5DC4Q86YG4 428 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 WDR49Q8IV35 697 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 CSGALNACT2Q8N6G5 542 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 EFHBQ8N7U6 833 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 APPL2Q8NEU8 664 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 CASP10Q92851 521 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 EEF2KMTQ96G04 330 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 KLHL5Q96PQ7 755 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 CGRRF1Q99675 332 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 GTPBP4Q9BZE4 634 aaKnown RBP7.06□□□□□ -1.28
CD44-204ENST00000279452 KCTD10Q9H3F6 313 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 CLSTN2Q9H4D0 955 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.06□□□□□ -1.28
CD44-204ENST00000279452 LMBRD1Q9NUN5 540 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 AGAP1Q9UPQ3 857 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 CTNND2Q9UQB3 1225 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 TIMM13Q9Y5L4 95 aaPredicted RBP7.06□□□□□ -1.28
CD44-204ENST00000279452 HCFC2Q9Y5Z7 792 aa7.06□□□□□ -1.28
CD44-204ENST00000279452 PTPRJQ12913 1337 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 ARHGEF37A1IGU5 675 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 TRIM49BA6NDI0 452 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 H7C4K7 107 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 SYN3O14994 580 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 CETN3O15182 167 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 GLP2RO95838 553 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 EPB41P11171 864 aaKnown RBP7.05□□□□□ -1.28
CD44-204ENST00000279452 LRPAP1P30533 357 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 PSMC2P35998 433 aaKnown RBP7.05□□□□□ -1.28
CD44-204ENST00000279452 PPP1R2P41236 205 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 PNPLA4P41247 253 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 STX17P56962 302 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 RBP5P82980 135 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 POU5F1Q01860 360 aaKnown RBP7.05□□□□□ -1.28
CD44-204ENST00000279452 YWHAHQ04917 246 aaPredicted RBP7.05□□□□□ -1.28
CD44-204ENST00000279452 DLX2Q07687 328 aaPredicted RBP7.05□□□□□ -1.28
CD44-204ENST00000279452 MYO1EQ12965 1108 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 ADAM9Q13443 819 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 ADAM15Q13444 863 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 TRPC3Q13507 836 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 PSMD6Q15008 389 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 ZBTB6Q15916 424 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 DUOXA2Q1HG44 320 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 DCAF17Q5H9S7 520 aaPredicted RBP7.05□□□□□ -1.28
CD44-204ENST00000279452 VARS2Q5ST30 1063 aaKnown RBP7.05□□□□□ -1.28
CD44-204ENST00000279452 RARS2Q5T160 578 aaKnown RBP7.05□□□□□ -1.28
CD44-204ENST00000279452 LIN9Q5TKA1 542 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 KIAA0319Q5VV43 1072 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 TCERG1LQ5VWI1 586 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 PTCRAQ6ISU1 281 aaPredicted RBP7.05□□□□□ -1.28
CD44-204ENST00000279452 ZNF280DQ6N043 979 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 ANKS3Q6ZW76 656 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 METTL23Q86XA0 190 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 CREBRFQ8IUR6 639 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 C12orf56Q8IXR9 622 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 FAM186BQ8IYM0 893 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 VN1R2Q8NFZ6 395 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 OR5B17Q8NGF7 314 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 NELFBQ8WX92 580 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 PIK3R5Q8WYR1 880 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 SUSD3Q96L08 255 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 POP1Q99575 1024 aaKnown RBP7.05□□□□□ -1.28
CD44-204ENST00000279452 MAN1C1Q9NR34 630 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 CHST7Q9NS84 486 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 INTS13Q9NVM9 706 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 CD207Q9UJ71 328 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 ITGA11Q9UKX5 1188 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 PCDHB8Q9UN66 801 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 TRAF3IP3Q9Y228 551 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 FAM50BQ9Y247 325 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 CDY1Q9Y6F8 540 aa7.05□□□□□ -1.28
CD44-204ENST00000279452 TDRD15B5MCY1 1934 aaKnown RBP7.05□□□□□ -1.28
CD44-204ENST00000279452 BICDL2A1A5D9 508 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 LRRIQ3A6PVS8 624 aaPredicted RBP7.04□□□□□ -1.28
CD44-204ENST00000279452 KPNA7A9QM74 516 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 PIRO00625 290 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 CYB561D2O14569 222 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 SPTLC1O15269 473 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 MBD3O95983 291 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 WEE2P0C1S8 567 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 TRIM49P0CI25 452 aa7.04□□□□□ -1.28
CD44-204ENST00000279452 TRIM49CP0CI26 452 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms