RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 TRIM58Q8NG06 486 aa15.59■□□□□ 0.09
TRIM23-202ENST00000274327 FAXDC2Q96IV6 333 aa15.59■□□□□ 0.09
TRIM23-202ENST00000274327 PCDHB18PQ96TA0 734 aa15.59■□□□□ 0.09
TRIM23-202ENST00000274327 NIF3L1Q9GZT8 377 aa15.59■□□□□ 0.09
TRIM23-202ENST00000274327 VRTNQ9H8Y1 702 aa15.59■□□□□ 0.09
TRIM23-202ENST00000274327 ACP6Q9NPH0 428 aa15.59■□□□□ 0.09
TRIM23-202ENST00000274327 TRIM17Q9Y577 477 aa15.59■□□□□ 0.09
TRIM23-202ENST00000274327 KRT5P13647 590 aa15.58■□□□□ 0.08
TRIM23-202ENST00000274327 ZSCAN20P17040 1043 aaPredicted RBP15.58■□□□□ 0.08
TRIM23-202ENST00000274327 GALCP54803 685 aa15.58■□□□□ 0.08
TRIM23-202ENST00000274327 ZNF699Q32M78 642 aa15.58■□□□□ 0.08
TRIM23-202ENST00000274327 ALKAL1Q6UXT8 129 aa15.58■□□□□ 0.08
TRIM23-202ENST00000274327 DNAAF5Q86Y56 855 aa15.58■□□□□ 0.08
TRIM23-202ENST00000274327 NXF3Q9H4D5 531 aaKnown RBP15.58■□□□□ 0.08
TRIM23-202ENST00000274327 A0A0A6YYK5 440 aaPredicted RBP15.57■□□□□ 0.08
TRIM23-202ENST00000274327 MMEP08473 750 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 ZNF132P52740 706 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 BPIFB4P59827 614 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 AMPD2Q01433 879 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 PTK7Q13308 1070 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 TRIM71Q2Q1W2 868 aaKnown RBP15.57■□□□□ 0.08
TRIM23-202ENST00000274327 ZNF677Q86XU0 584 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 TMEM130Q8N3G9 435 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 NOX5Q96PH1 765 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 ISCUQ9H1K1 167 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 TAS2R14Q9NYV8 317 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 CNTN3Q9P232 1028 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 ITGA11Q9UKX5 1188 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 PCDHB4Q9Y5E5 795 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 PCDHB2Q9Y5E7 798 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 MRFAP1Q9Y605 127 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 NCANO14594 1321 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 ANO9A1A5B4 782 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 STAU1O95793 577 aaKnown RBP15.57■□□□□ 0.08
TRIM23-202ENST00000274327 ITGB3P05106 788 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 TMEM253P0C7T8 217 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 GZMAP12544 262 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 ATICP31939 592 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 ASPAP45381 313 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 YARSP54577 528 aaKnown RBP15.57■□□□□ 0.08
TRIM23-202ENST00000274327 ZBTB6Q15916 424 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 XKR4Q5GH76 650 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 TAF3Q5VWG9 929 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 SLC43A3Q8NBI5 491 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 KIF12Q96FN5 646 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 GLT1D1Q96MS3 346 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 TRIM6Q9C030 488 aaPredicted RBP15.57■□□□□ 0.08
TRIM23-202ENST00000274327 CXCL16Q9H2A7 254 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 SEPT11Q9NVA2 429 aaKnown RBP15.57■□□□□ 0.08
TRIM23-202ENST00000274327 DPP3Q9NY33 737 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 TSKSQ9UJT2 592 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 HES2Q9Y543 173 aa15.57■□□□□ 0.08
TRIM23-202ENST00000274327 HTTP42858 3142 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 ANKRD62A6NC57 917 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 BUB1O43683 1085 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 RPS6KA5O75582 802 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 RECQL4O94761 1208 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 KRT19P08727 400 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 CTSHP09668 335 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 TUBB2AQ13885 445 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 FAM26DQ5JW98 314 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 PAPD7Q5XG87 772 aaKnown RBP15.56■□□□□ 0.08
TRIM23-202ENST00000274327 TMEM270Q6UE05 265 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 RBBP8NLQ8NC74 664 aaPredicted RBP15.56■□□□□ 0.08
TRIM23-202ENST00000274327 SMG8Q8ND04 991 aaKnown RBP15.56■□□□□ 0.08
TRIM23-202ENST00000274327 ZMAT2Q96NC0 199 aaKnown RBP15.56■□□□□ 0.08
TRIM23-202ENST00000274327 ALS2CR12Q96Q35 445 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 TUBB2BQ9BVA1 445 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 BCO2Q9BYV7 579 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.56■□□□□ 0.08
TRIM23-202ENST00000274327 ST3GAL5Q9UNP4 418 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 PCDHGC5Q9Y5F6 944 aa15.56■□□□□ 0.08
TRIM23-202ENST00000274327 TMCO5BA8MYB1 307 aa15.55■□□□□ 0.08
TRIM23-202ENST00000274327 RTN2O75298 545 aa15.55■□□□□ 0.08
TRIM23-202ENST00000274327 SLU7O95391 586 aaKnown RBP15.55■□□□□ 0.08
TRIM23-202ENST00000274327 ATP1A1P05023 1023 aaKnown RBP15.55■□□□□ 0.08
TRIM23-202ENST00000274327 POLR2BP30876 1174 aaKnown RBP15.55■□□□□ 0.08
TRIM23-202ENST00000274327 THPOP40225 353 aa15.55■□□□□ 0.08
TRIM23-202ENST00000274327 GUCY2FP51841 1108 aa15.55■□□□□ 0.08
TRIM23-202ENST00000274327 GABPB1Q06547 395 aaPredicted RBP15.55■□□□□ 0.08
TRIM23-202ENST00000274327 ZNF667Q5HYK9 610 aa15.55■□□□□ 0.08
TRIM23-202ENST00000274327 TSPAN18Q96SJ8 248 aa15.55■□□□□ 0.08
TRIM23-202ENST00000274327 CHST12Q9NRB3 414 aa15.55■□□□□ 0.08
TRIM23-202ENST00000274327 TRMT13Q9NUP7 481 aaKnown RBP15.55■□□□□ 0.08
TRIM23-202ENST00000274327 POLIQ9UNA4 740 aa15.55■□□□□ 0.08
TRIM23-202ENST00000274327 PHF24Q9UPV7 400 aa15.55■□□□□ 0.08
TRIM23-202ENST00000274327 IPPQ9Y573 584 aa15.55■□□□□ 0.08
TRIM23-202ENST00000274327 A0A1W2PQ45 241 aaPredicted RBP15.54■□□□□ 0.08
TRIM23-202ENST00000274327 A0A1W2PQY0 241 aa15.54■□□□□ 0.08
TRIM23-202ENST00000274327 CALCAP01258 141 aa15.54■□□□□ 0.08
TRIM23-202ENST00000274327 RBP5P82980 135 aa15.54■□□□□ 0.08
TRIM23-202ENST00000274327 ARRDC4Q8NCT1 418 aa15.54■□□□□ 0.08
TRIM23-202ENST00000274327 SH3TC2Q8TF17 1288 aa15.54■□□□□ 0.08
TRIM23-202ENST00000274327 RNF39Q9H2S5 420 aa15.54■□□□□ 0.08
TRIM23-202ENST00000274327 ERVK-5Q9HDB9 667 aa15.54■□□□□ 0.08
TRIM23-202ENST00000274327 CISHQ9NSE2 258 aa15.54■□□□□ 0.08
TRIM23-202ENST00000274327 CDC23Q9UJX2 597 aa15.54■□□□□ 0.08
TRIM23-202ENST00000274327 AGAP1Q9UPQ3 857 aa15.54■□□□□ 0.08
TRIM23-202ENST00000274327 PTPN22Q9Y2R2 807 aa15.54■□□□□ 0.08
TRIM23-202ENST00000274327 JRKLQ9Y4A0 524 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms