RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 TMA16Q96EY4 203 aaKnown RBP12.04□□□□□ -0.48
USP53-201ENST00000274030 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.04□□□□□ -0.48
USP53-201ENST00000274030 MAD2L2Q9UI95 211 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 PCDHGB4Q9UN71 923 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 CTDNEP1O95476 244 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 GTF2H1P32780 548 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 ZNF157P51786 506 aaPredicted RBP12.04□□□□□ -0.48
USP53-201ENST00000274030 C2CD6Q53TS8 623 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 GPAT2Q6NUI2 795 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 SLC7A14Q8TBB6 771 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 ASAP3Q8TDY4 903 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 TEKT4Q8WW24 435 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 ATG4CQ96DT6 458 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 CYFIP2Q96F07 1278 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 DCUN1D1Q96GG9 259 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 ELMO2Q96JJ3 720 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 UVRAGQ9P2Y5 699 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 CCDC22O60826 627 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 CSF1RP07333 972 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 ORC1Q13415 861 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
USP53-201ENST00000274030 ITPK1Q13572 414 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 KYNUQ16719 465 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 ATF7IP2Q5U623 682 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 RASGRP2Q7LDG7 609 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 ATPAF2Q8N5M1 289 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 ICA1LQ8NDH6 482 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 PTPRN2Q92932 1015 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 LATS2Q9NRM7 1088 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 KCNH7Q9NS40 1196 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 GTPBP10A4D1E9 387 aaKnown RBP12.04□□□□□ -0.48
USP53-201ENST00000274030 ZNF197O14709 1029 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 MEFVO15553 781 aaPredicted RBP12.04□□□□□ -0.48
USP53-201ENST00000274030 RAD51CO43502 376 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 TRAPPC3O43617 180 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 MAP3K6O95382 1288 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 GYPCP04921 128 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 ETFBP38117 255 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 FLOT2Q14254 428 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 CYTH1Q15438 398 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 ADCK2Q7Z695 626 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 SPATA18Q8TC71 538 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 SLC24A3Q9HC58 644 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 HPS4Q9NQG7 708 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.04□□□□□ -0.48
USP53-201ENST00000274030 CNTNAP5Q8WYK1 1306 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 IQCA1LA6NCM1 817 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 EEF2KO00418 725 aaKnown RBP12.04□□□□□ -0.48
USP53-201ENST00000274030 ENO3P13929 434 aaPredicted RBP12.04□□□□□ -0.48
USP53-201ENST00000274030 BRD2P25440 801 aaKnown RBP12.04□□□□□ -0.48
USP53-201ENST00000274030 AKT1P31749 480 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 NBPF9Q3BBW0 867 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 MGAT5BQ3V5L5 792 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 RRM2BQ7LG56 351 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 MFN1Q8IWA4 741 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 PARP9Q8IXQ6 854 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 RBM46Q8TBY0 533 aaKnown RBP12.04□□□□□ -0.48
USP53-201ENST00000274030 TAAR1Q96RJ0 339 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 MXRA8Q9BRK3 442 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 OSBPL8Q9BZF1 889 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 WWP1Q9H0M0 922 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 YY1AP1Q9H869 796 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 EHD2Q9NZN4 543 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 SHROOM2Q13796 1616 aa12.04□□□□□ -0.48
USP53-201ENST00000274030 TARSL2A2RTX5 802 aaKnown RBP12.03□□□□□ -0.48
USP53-201ENST00000274030 RPS6KA5O75582 802 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 PPP1R37O75864 691 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 GH1P01241 217 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 KRT4P19013 534 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 HMOX2P30519 316 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 BYSLQ13895 437 aaKnown RBP12.03□□□□□ -0.48
USP53-201ENST00000274030 NAB2Q15742 525 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 C16orf87Q6PH81 154 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 CST8O60676 142 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 KLRC1P26715 233 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 OCA2Q04671 838 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 ANO5Q75V66 913 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 MOV10L1Q9BXT6 1211 aaKnown RBP12.03□□□□□ -0.48
USP53-201ENST00000274030 TASP1Q9H6P5 420 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 FAM95CA0A1B0GW59 222 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 SSU72P8A0A1W2PR75 194 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 ATP6V1E1P36543 226 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 MDH1P40925 334 aaKnown RBP12.03□□□□□ -0.48
USP53-201ENST00000274030 CARSP49589 748 aaKnown RBP12.03□□□□□ -0.48
USP53-201ENST00000274030 GMPSP49915 693 aaPredicted RBP12.03□□□□□ -0.48
USP53-201ENST00000274030 MUC3BQ9H195 1237 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 KLK14Q9P0G3 267 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 ZNF212Q9UDV6 495 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 ALG6Q9Y672 507 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 NTSR2O95665 410 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 TCN1P20061 433 aaPredicted RBP12.03□□□□□ -0.48
USP53-201ENST00000274030 OR1G1P47890 313 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 TWF1Q12792 350 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 KYAT1Q16773 422 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 GLRA4Q5JXX5 417 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 C3orf62Q6ZUJ4 267 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 IPMKQ8NFU5 416 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 ARHGEF26Q96DR7 871 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 TSSK1BQ9BXA7 367 aa12.03□□□□□ -0.48
USP53-201ENST00000274030 NT5C1AQ9BXI3 368 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms