RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 C15orf59Q2T9L4 293 aaPredicted RBP13.88□□□□□ -0.19
PRDM16-201ENST00000270722 APOL4Q9BPW4 351 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 VCPKMTQ9H867 229 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 GINM1Q9NU53 330 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 CCT3P49368 545 aaKnown RBP13.88□□□□□ -0.19
PRDM16-201ENST00000270722 NAA35Q5VZE5 725 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 C4orf22Q6V702 233 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 THNSL1Q8IYQ7 743 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 CCDC24Q8N4L8 307 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 WDR41Q9HAD4 459 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 LATS2Q9NRM7 1088 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 USP17L15C9J2P7 530 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 C19orf81C9J6K1 198 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 USP17L13C9JLJ4 530 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 USP17L11C9JVI0 530 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 USP17L18D6R9N7 530 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 USP17L22D6RA61 530 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 USP17L17D6RBQ6 530 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 USP17L19D6RCP7 530 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 USP17L20D6RJB6 530 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 RARBP10826 455 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 GRK3P35626 688 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 USP17L24Q0WX57 530 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 SPATA21Q7Z572 469 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 STK32CQ86UX6 486 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 TAB3Q8N5C8 712 aaPredicted RBP13.88□□□□□ -0.19
PRDM16-201ENST00000270722 PITPNM3Q9BZ71 974 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 ZFATQ9P243 1243 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 SLC9A2Q9UBY0 812 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 DNAJC12Q9UKB3 198 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 BIVM-ERCC5R4GMW8 1640 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 SYNMO15061 1565 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 MAGEA13PA6NCF6 341 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 JAK2O60674 1132 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 FBLN1P23142 703 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 ARMC7Q9H6L4 198 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 SLC30A1Q9Y6M5 507 aa13.88□□□□□ -0.19
PRDM16-201ENST00000270722 ETFBP38117 255 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 ACTR2P61160 394 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 ME3Q16798 604 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 TRIM65Q6PJ69 517 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 PCYOX1LQ8NBM8 494 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 NDST4Q9H3R1 872 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 DMAP1Q9NPF5 467 aaPredicted RBP13.87□□□□□ -0.19
PRDM16-201ENST00000270722 RGS12O14924 1447 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 ACADSBP45954 432 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 AKR1D1P51857 326 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 DEPDC7Q96QD5 511 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 PANX2Q96RD6 677 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 EPC1Q9H2F5 836 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 PPARGC1AQ9UBK2 798 aaKnown RBP13.87□□□□□ -0.19
PRDM16-201ENST00000270722 PCP4L1A6NKN8 68 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 SNPHO15079 494 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 MMP1P03956 469 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 CPA1P15085 419 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 ROR1Q01973 937 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 RBBP7Q16576 425 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 RNF180Q86T96 592 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 FAM167BQ9BTA0 163 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 TUFT1Q9NNX1 390 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 FBXO28Q9NVF7 368 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 MAD2L2Q9UI95 211 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 MCM8Q9UJA3 840 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 PCDHA7Q9UN72 937 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 CCDC189A1A4V9 331 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 CFAP69A5D8W1 941 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 HARS2P49590 506 aaKnown RBP13.87□□□□□ -0.19
PRDM16-201ENST00000270722 HIF1AQ16665 826 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 CCDC157Q569K6 752 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 C11orf88Q6PI97 169 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 ADCK2Q7Z695 626 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 RFT1Q96AA3 541 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 CATSPERBQ9H7T0 1116 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 CYP27A1Q02318 531 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 POU5F1BQ06416 359 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 UNC13DQ70J99 1090 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 FAM133AQ8N9E0 248 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 ZNF512Q96ME7 567 aaPredicted RBP13.87□□□□□ -0.19
PRDM16-201ENST00000270722 EMILIN2Q9BXX0 1053 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 NDUFS3O75489 264 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 TMEM270Q6UE05 265 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 SLC20A1Q8WUM9 679 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 NARS2Q96I59 477 aaKnown RBP13.87□□□□□ -0.19
PRDM16-201ENST00000270722 HINFPQ9BQA5 517 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 KCND2Q9NZV8 630 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 HEY1Q9Y5J3 304 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 UBA6A0AVT1 1052 aaPredicted RBP13.87□□□□□ -0.19
PRDM16-201ENST00000270722 CDC27P30260 824 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 GRIK1P39086 918 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 HDLBPQ00341 1268 aaKnown RBP13.87□□□□□ -0.19
PRDM16-201ENST00000270722 PTPAQ15257 358 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 LRRC8AQ8IWT6 810 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 LGR6Q9HBX8 967 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 SH3GLB1Q9Y371 365 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 DTNAQ9Y4J8 743 aa13.87□□□□□ -0.19
PRDM16-201ENST00000270722 TLR2O60603 784 aa13.86□□□□□ -0.19
PRDM16-201ENST00000270722 ATXN3P54252 364 aaPredicted RBP13.86□□□□□ -0.19
PRDM16-201ENST00000270722 TPI1P60174 286 aa13.86□□□□□ -0.19
PRDM16-201ENST00000270722 MYBPC2Q14324 1141 aa13.86□□□□□ -0.19
PRDM16-201ENST00000270722 INTS13Q9NVM9 706 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms