RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 PMM2O15305 246 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 ECE2O60344 883 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 KRT10P13645 584 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 SETDB1Q15047 1291 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 XKR9Q5GH70 373 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 UBR3Q6ZT12 1888 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 MYPNQ86TC9 1320 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 TXLNGQ9NUQ3 528 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 NRXN2Q9P2S2 1712 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 USP21Q9UK80 565 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 DENND3A2RUS2 1198 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 NFIBO00712 420 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 KRT15P19012 456 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 TRAF1Q13077 416 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 TAF11Q15544 211 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 STRIP1Q5VSL9 837 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 TRABD2AQ86V40 505 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 ZNF622Q969S3 477 aaKnown RBP eCLIP29.17■■■□□ 2.264e-7■■□□□ 13.7
CBX4-201ENST00000269397 LRRC37BQ96QE4 947 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 KIAA1586Q9HCI6 787 aa29.17■■■□□ 2.26
CBX4-201ENST00000269397 SCN9AQ15858 1988 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 RPA3P35244 121 aaPredicted RBP29.16■■■□□ 2.26
CBX4-201ENST00000269397 ZFYVE27Q5T4F4 411 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 PCNX4Q63HM2 1172 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 GRAMD1AQ96CP6 724 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 GLIS2Q9BZE0 524 aaPredicted RBP29.16■■■□□ 2.26
CBX4-201ENST00000269397 SLX4Q8IY92 1834 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 UMODL1Q5DID0 1318 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 PIAS1O75925 651 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 CBX6O95503 412 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 NPR1P16066 1061 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 ABL2P42684 1182 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 NSFP46459 744 aaKnown RBP29.16■■■□□ 2.26
CBX4-201ENST00000269397 CCNHP51946 323 aaPredicted RBP29.16■■■□□ 2.26
CBX4-201ENST00000269397 NCKAP1LP55160 1127 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 CENPCQ03188 943 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 CCNG2Q16589 344 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 SLC39A4Q6P5W5 647 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 TMEM161BQ8NDZ6 487 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 CHURC1Q8WUH1 139 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 TMEM174Q8WUU8 243 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 CNKSR1Q969H4 720 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 RAB3IPQ96QF0 476 aaPredicted RBP29.16■■■□□ 2.26
CBX4-201ENST00000269397 TRABDQ9H4I3 376 aa29.16■■■□□ 2.26
CBX4-201ENST00000269397 ASTN2O75129 1339 aaPredicted RBP29.15■■■□□ 2.26
CBX4-201ENST00000269397 GM2AP17900 193 aa29.15■■■□□ 2.26
CBX4-201ENST00000269397 SKIV2L2P42285 1042 aaKnown RBP29.15■■■□□ 2.26
CBX4-201ENST00000269397 NPTX2P47972 431 aa29.15■■■□□ 2.26
CBX4-201ENST00000269397 NAIF1Q69YI7 327 aaPredicted RBP29.15■■■□□ 2.26
CBX4-201ENST00000269397 CCDC15Q0P6D6 951 aa29.15■■■□□ 2.26
CBX4-201ENST00000269397 HOMER2Q9NSB8 354 aa29.15■■■□□ 2.26
CBX4-201ENST00000269397 CLRN2A0PK11 232 aa29.14■■■□□ 2.26
CBX4-201ENST00000269397 H0Y3Z8 333 aa29.14■■■□□ 2.26
CBX4-201ENST00000269397 PROSCO94903 275 aa29.14■■■□□ 2.26
CBX4-201ENST00000269397 KLRC2P26717 231 aa29.14■■■□□ 2.26
CBX4-201ENST00000269397 PEX19P40855 299 aa29.14■■■□□ 2.26
CBX4-201ENST00000269397 SLC1A1P43005 524 aa29.14■■■□□ 2.26
CBX4-201ENST00000269397 SPOPLQ6IQ16 392 aa29.14■■■□□ 2.26
CBX4-201ENST00000269397 TKFCQ3LXA3 575 aa29.14■■■□□ 2.25
CBX4-201ENST00000269397 AGO4Q9HCK5 861 aaKnown RBP29.14■■■□□ 2.25
CBX4-201ENST00000269397 STARD13Q9Y3M8 1113 aa29.14■■■□□ 2.25
CBX4-201ENST00000269397 ACTL7BQ9Y614 415 aa29.14■■■□□ 2.25
CBX4-201ENST00000269397 TCF4P15884 667 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 DSG3P32926 999 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 GCKP35557 465 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 SLC1A5Q15758 541 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 BSNDQ8WZ55 320 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 FAM213AQ9BRX8 229 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 VPS37BQ9H9H4 285 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 SERPINA10Q9UK55 444 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 DNPEPQ9ULA0 475 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 CCPG1Q9ULG6 757 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 USH1CQ9Y6N9 552 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 A0A1W2PPM1 405 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 BANF1O75531 89 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 CA4P22748 312 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 EPHB2P29323 1055 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 CYP24A1Q07973 514 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 MOGSQ13724 837 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 CAPRIN2Q6IMN6 1127 aaKnown RBP29.13■■■□□ 2.25
CBX4-201ENST00000269397 ZCCHC9Q8N567 271 aaKnown RBP29.13■■■□□ 2.25
CBX4-201ENST00000269397 FAM13CQ8NE31 585 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 HAUS1Q96CS2 278 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 MRIQ9BWK5 157 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 LRMDAQ9H2I8 198 aa29.13■■■□□ 2.25
CBX4-201ENST00000269397 AVENQ9NQS1 362 aaPredicted RBP29.13■■■□□ 2.25
CBX4-201ENST00000269397 SMNDC1O75940 238 aaKnown RBP eCLIP29.12■■■□□ 2.251e-7■■■□□ 15.1
CBX4-201ENST00000269397 FGFR1P11362 822 aa29.12■■■□□ 2.25
CBX4-201ENST00000269397 YARSP54577 528 aaKnown RBP29.12■■■□□ 2.25
CBX4-201ENST00000269397 MRPS9P82933 396 aaKnown RBP29.12■■■□□ 2.25
CBX4-201ENST00000269397 RHOT1Q8IXI2 618 aa29.12■■■□□ 2.25
CBX4-201ENST00000269397 DENND1AQ8TEH3 1009 aa29.12■■■□□ 2.25
CBX4-201ENST00000269397 ST6GALNAC4Q9H4F1 302 aa29.12■■■□□ 2.25
CBX4-201ENST00000269397 T-ENOLP0DO92 83 aa29.12■■■□□ 2.25
CBX4-201ENST00000269397 ATF7P17544 494 aaPredicted RBP29.12■■■□□ 2.25
CBX4-201ENST00000269397 SPARCL1Q14515 664 aa29.12■■■□□ 2.25
CBX4-201ENST00000269397 LONP2Q86WA8 852 aa29.12■■■□□ 2.25
CBX4-201ENST00000269397 IWS1Q96ST2 819 aa29.12■■■□□ 2.25
CBX4-201ENST00000269397 C1orf112Q9NSG2 853 aa29.12■■■□□ 2.25
CBX4-201ENST00000269397 EXOC7Q9UPT5 735 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms