RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 STAG3L1P0CL83 205 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 GZMAP12544 262 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 DARSP14868 501 aaKnown RBP16.48■□□□□ 0.23
COPS3-201ENST00000268717 ITGB8P26012 769 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 PDE6CP51160 858 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 TUBB4BP68371 445 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 NOP14P78316 857 aaKnown RBP16.48■□□□□ 0.23
COPS3-201ENST00000268717 CUL2Q13617 745 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 SEZ6Q53EL9 994 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 TATDN2Q93075 761 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 TBX21Q9UL17 535 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 CNTN6Q9UQ52 1028 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 CAPN6Q9Y6Q1 641 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 CD4P01730 458 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 TNNC2P02585 160 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 TMEM191BP0C7N4 346 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 PRLRP16471 622 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 CHMP4BP1P59074 171 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 HIC1Q14526 733 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 KIZQ2M2Z5 673 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 SGSM1Q2NKQ1 1148 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 RUFY4Q6ZNE9 571 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 C7orf31Q8N865 590 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 CEP112Q8N8E3 955 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 PPP1R16BQ96T49 567 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 UBE2OQ9C0C9 1292 aaKnown RBP16.48■□□□□ 0.23
COPS3-201ENST00000268717 NCANO14594 1321 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 ANKRD62A6NC57 917 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 TLR3O15455 904 aaKnown RBP16.47■□□□□ 0.23
COPS3-201ENST00000268717 MOCS3O95396 460 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 CYP11B1P15538 503 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 EIF4BP23588 611 aaKnown RBP16.47■□□□□ 0.23
COPS3-201ENST00000268717 GRM5P41594 1212 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 CDR2Q01850 454 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 TCEAL1Q15170 157 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 SESTD1Q86VW0 696 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 EFCAB13Q8IY85 973 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 CEP120Q8N960 986 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 MNS1Q8NEH6 495 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 BADQ92934 168 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 FAM84AQ96KN4 292 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 PI4K2AQ9BTU6 479 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 PACSIN1Q9BY11 444 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 MTMR12Q9C0I1 747 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 FAM49AQ9H0Q0 323 aaPredicted RBP16.47■□□□□ 0.23
COPS3-201ENST00000268717 ISCUQ9H1K1 167 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 PLEKHA5Q9HAU0 1116 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 APOBEC3GQ9HC16 384 aaKnown RBP16.47■□□□□ 0.23
COPS3-201ENST00000268717 HDAC6Q9UBN7 1215 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 SALL4Q9UJQ4 1053 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 C2CD2Q9Y426 696 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 PCDHB2Q9Y5E7 798 aa16.47■□□□□ 0.23
COPS3-201ENST00000268717 TRIP12Q14669 1992 aaPredicted RBP16.46■□□□□ 0.23
COPS3-201ENST00000268717 EFCAB8A8MWE9 144 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
COPS3-201ENST00000268717 CYP26A1O43174 497 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 TREHO43280 583 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 CSDE1O75534 798 aaKnown RBP16.46■□□□□ 0.23
COPS3-201ENST00000268717 CXCL8P10145 99 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 RAG1P15918 1043 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 ACO1P21399 889 aaKnown RBP16.46■□□□□ 0.23
COPS3-201ENST00000268717 HOXA11P31270 313 aaPredicted RBP16.46■□□□□ 0.23
COPS3-201ENST00000268717 CRYBB1P53674 252 aaPredicted RBP16.46■□□□□ 0.23
COPS3-201ENST00000268717 NOTUMQ6P988 496 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 SLC27A1Q6PCB7 646 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 CATSPER4Q7RTX7 472 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 NOP9Q86U38 636 aaKnown RBP16.46■□□□□ 0.23
COPS3-201ENST00000268717 UBE2Q2Q8WVN8 375 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 CPB2Q96IY4 423 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 FAM124BQ9H5Z6 455 aaPredicted RBP16.46■□□□□ 0.23
COPS3-201ENST00000268717 GTF2IRD1Q9UHL9 959 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 DERAQ9Y315 318 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 SAR1BQ9Y6B6 198 aa16.46■□□□□ 0.23
COPS3-201ENST00000268717 LAMA2P24043 3122 aaKnown RBP16.46■□□□□ 0.23
COPS3-201ENST00000268717 TADA3O75528 432 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 ATP1A1P05023 1023 aaKnown RBP16.45■□□□□ 0.22
COPS3-201ENST00000268717 USP8P40818 1118 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 TRPC3Q13507 836 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 NBPF20Q3BBV1 942 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 RPAINQ86UA6 219 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 SLC47A2Q86VL8 602 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 RPUSD2Q8IZ73 545 aaKnown RBP16.45■□□□□ 0.22
COPS3-201ENST00000268717 TDHQ8IZJ6 230 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 UBR7Q8N806 425 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 SLC20A1Q8WUM9 679 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 DNAJB3Q8WWF6 145 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 CTNNBL1Q8WYA6 563 aaPredicted RBP16.45■□□□□ 0.22
COPS3-201ENST00000268717 RFFLQ8WZ73 363 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 DDX1Q92499 740 aaKnown RBP16.45■□□□□ 0.22
COPS3-201ENST00000268717 NIF3L1Q9GZT8 377 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 VRTNQ9H8Y1 702 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 NUB1Q9Y5A7 615 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 RTN2O75298 545 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 TIMP1P01033 207 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 CHRNB2P17787 502 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 ATICP31939 592 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 GALCP54803 685 aa16.45■□□□□ 0.22
COPS3-201ENST00000268717 HADHBP55084 474 aaKnown RBP16.45■□□□□ 0.22
COPS3-201ENST00000268717 TFAMQ00059 246 aaKnown RBP16.45■□□□□ 0.22
COPS3-201ENST00000268717 FMO1Q01740 532 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms