RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 RGS7P49802 495 aa13.21□□□□□ -0.3
CDH11-201ENST00000268603 ZNF211Q13398 564 aaPredicted RBP13.21□□□□□ -0.3
CDH11-201ENST00000268603 THTPAQ9BU02 230 aa13.21□□□□□ -0.3
CDH11-201ENST00000268603 SCN3BQ9NY72 215 aa13.21□□□□□ -0.3
CDH11-201ENST00000268603 RBAKQ9NYW8 714 aaPredicted RBP13.21□□□□□ -0.3
CDH11-201ENST00000268603 ASB14A6NK59 587 aa13.21□□□□□ -0.3
CDH11-201ENST00000268603 PPP6R2O75170 966 aa13.21□□□□□ -0.3
CDH11-201ENST00000268603 STAT3P40763 770 aa13.21□□□□□ -0.3
CDH11-201ENST00000268603 CDH18Q13634 790 aa13.21□□□□□ -0.3
CDH11-201ENST00000268603 C11orf88Q6PI97 169 aa13.21□□□□□ -0.3
CDH11-201ENST00000268603 MIER2Q8N344 545 aa13.21□□□□□ -0.3
CDH11-201ENST00000268603 LCORLQ8N3X6 602 aa13.21□□□□□ -0.3
CDH11-201ENST00000268603 AKAP7Q9P0M2 348 aaPredicted RBP13.21□□□□□ -0.3
CDH11-201ENST00000268603 ZMYND8Q9ULU4 1186 aaPredicted RBP13.21□□□□□ -0.3
CDH11-201ENST00000268603 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.21□□□□□ -0.3
CDH11-201ENST00000268603 A0A1W2PP64 1363 aa13.21□□□□□ -0.3
CDH11-201ENST00000268603 EIF3DO15371 548 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDH11-201ENST00000268603 DYNC1LI2O43237 492 aaPredicted RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 VAMP7P51809 220 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 ACTN3Q08043 901 aaPredicted RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 DDX39BQ13838 428 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 AKIRIN2Q53H80 203 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 TRIM65Q6PJ69 517 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 P3H2Q8IVL5 708 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 VPS37AQ8NEZ2 397 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 KATNAL1Q9BW62 490 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 NMRK2Q9NPI5 230 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 CYP39A1Q9NYL5 469 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 DIS3Q9Y2L1 958 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 NUP160Q12769 1436 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 MAGI3Q5TCQ9 1506 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 EVPLLA8MZ36 301 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 E9PBE3 544 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 ECE2O60344 883 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 AKAP5P24588 427 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 USP10Q14694 798 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 ZNF746Q6NUN9 644 aaPredicted RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 HEATR4Q86WZ0 1026 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 GAS2L3Q86XJ1 694 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 RTL3Q8N8U3 475 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 TGS1Q96RS0 853 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 RSPH9Q9H1X1 276 aaPredicted RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 SRP68Q9UHB9 627 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 ATP8B1O43520 1251 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 C10orf120Q5SQS8 335 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 RD3Q7Z3Z2 195 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 NANOGNBQ7Z5D8 188 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 ASAP1Q9ULH1 1129 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 SPTLC1O15269 473 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 CAND2O75155 1236 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 SRP72O76094 671 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 ENO1P06733 434 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 EIF3EP60228 445 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 NOL9Q5SY16 702 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 UCMAQ8WVF2 138 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 DNAJC1Q96KC8 554 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 RNF14Q9UBS8 474 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 FBXO10Q9UK96 956 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 DNMT1P26358 1616 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 RPS6KA5O75582 802 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 TXNP10599 105 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 PHKG2P15735 406 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 ADRA2BP18089 450 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 HIRAP54198 1017 aaPredicted RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 TRIM25Q14258 630 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 KCNB1Q14721 858 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 PAN2Q504Q3 1202 aaKnown RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 SFR1Q86XK3 245 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 SYNE4Q8N205 404 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 SLC7A14Q8TBB6 771 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 PIK3C2GO75747 1445 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 FAM196BA6NMK8 535 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 TCN1P20061 433 aaPredicted RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 CBFBQ13951 182 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 TIGD7Q6NT04 549 aaPredicted RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 SPRTNQ9H040 489 aaPredicted RBP13.2□□□□□ -0.3
CDH11-201ENST00000268603 CARD9Q9H257 536 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 TBC1D22BQ9NU19 505 aa13.2□□□□□ -0.3
CDH11-201ENST00000268603 RGS5O15539 181 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 PSMD3O43242 534 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 ITGA4P13612 1032 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 CAPRIN2Q6IMN6 1127 aaKnown RBP13.19□□□□□ -0.3
CDH11-201ENST00000268603 MACC1Q6ZN28 852 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 DPP10Q8N608 796 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 COA1Q9GZY4 146 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 KCNQ3O43525 872 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 HIC1Q14526 733 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 TASP1Q9H6P5 420 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 RNF149Q8NC42 400 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 MRPL1Q9BYD6 325 aaKnown RBP13.19□□□□□ -0.3
CDH11-201ENST00000268603 BLOC1S6Q9UL45 172 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 PSMC3P17980 439 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 WEE1P30291 646 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 LRRC14Q15048 493 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 TAF13Q15543 124 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 IER5Q5VY09 327 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 ZNF544Q6NX49 715 aa13.19□□□□□ -0.3
CDH11-201ENST00000268603 MTHFD1LQ6UB35 978 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms