RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 COBLL1Q53SF7 1204 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 ATRIPQ8WXE1 791 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 UVRAGQ9P2Y5 699 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 SNX12Q9UMY4 172 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 TMEM253P0C7T8 217 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 DR1Q01658 176 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 ARHGEF19Q8IW93 802 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 ABRAQ8N0Z2 381 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 CALR3Q96L12 384 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 RUNDC3BQ96NL0 473 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 RNF208Q9H0X6 261 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 MRFAP1Q9Y605 127 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 CCDC188H7C350 402 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 IVLP07476 585 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 PTGISQ16647 500 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 DARS2Q6PI48 645 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 SLC47A2Q86VL8 602 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 RHOT1Q8IXI2 618 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 KIAA0319LQ8IZA0 1049 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 RBM41Q96IZ5 413 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 PACSIN1Q9BY11 444 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 THAP2Q9H0W7 228 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 SIK3Q9Y2K2 1263 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 DIS3Q9Y2L1 958 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 MAFBQ9Y5Q3 323 aaPredicted RBP15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 RPTORQ8N122 1335 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 UNCXA6NJT0 531 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 DHX15O43143 795 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 EIF4BP23588 611 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 RTP1P59025 263 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 CDR2Q01850 454 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 CRHR2Q13324 411 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 STILQ15468 1287 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 RUFY4Q6ZNE9 571 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 IFNL1Q8IU54 200 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 CCDC63Q8NA47 563 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 BSNDQ8WZ55 320 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 EPC1Q9H2F5 836 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 RNF19AQ9NV58 838 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 CDK17Q00537 523 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 PAN2Q504Q3 1202 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 ZNF677Q86XU0 584 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 SLC20A1Q8WUM9 679 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 LENG1Q96BZ8 264 aaPredicted RBP15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 DDX47Q9H0S4 455 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 WNT8AQ9H1J5 351 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 FAM114A2Q9NRY5 505 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 N4BP2Q86UW6 1770 aaPredicted RBP15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 LACTBL1A8MY62 500 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 DCDC2CA8MYV0 355 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 TJP3O95049 919 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 MMP3P08254 477 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 RAP1GAPP47736 663 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 SP2Q02086 613 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 PALM2Q8IXS6 379 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 C1orf131Q8NDD1 294 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 ZBTB10Q96DT7 871 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 CISHQ9NSE2 258 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 SLC12A6Q9UHW9 1150 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 CACNA1SQ13698 1873 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 LOC102724159A0A0B4J2E5 919 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 NDC80O14777 642 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 B4GALT5O43286 388 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 GRAP2O75791 330 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 PNPLA4P41247 253 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 ITKQ08881 620 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 PWP2Q15269 919 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 ARL13BQ3SXY8 428 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 SLC9A9Q8IVB4 645 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 HOMER3Q9NSC5 361 aa15.35■□□□□ 0.05
PDLIM2-201ENST00000265810 SMPD1P17405 629 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 IRX5P78411 483 aaPredicted RBP15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 MCEEQ96PE7 176 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 STAP1Q9ULZ2 295 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 GOLGA6CA6NDK9 693 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 EPHB6O15197 1021 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 GOLGA6DP0CG33 693 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 PTENP60484 403 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 CEP85LQ5SZL2 805 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 NYAP1Q6ZVC0 841 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 MS4A14Q96JA4 679 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.34■□□□□ 0.051e-6■■■■□ 19.3
PDLIM2-201ENST00000265810 GOLGA6AQ9NYA3 693 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 POLIQ9UNA4 740 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 CA12O43570 354 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 PQBP1O60828 265 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 CAPN2P17655 700 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 KCNMA1Q12791 1236 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 BBOF1Q8ND07 529 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 MORC4Q8TE76 937 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 ASB7Q9H672 318 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 AIPL1Q9NZN9 384 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 RPLP2P05387 115 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 THP07101 528 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 PDGFRAP16234 1089 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 SARNPP82979 210 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 NME3Q13232 169 aa15.34■□□□□ 0.05
PDLIM2-201ENST00000265810 ACOT1Q86TX2 421 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms