RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 PI15O43692 258 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 XYLBO75191 536 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 ABLIM3O94929 683 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 CLTAP09496 248 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 SRFP11831 508 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 PLCG1P19174 1290 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 SCP2P22307 547 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 DDIT3P35638 169 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 HTR4Q13639 388 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 DHX8Q14562 1220 aaKnown RBP10.61□□□□□ -0.71
VPS41-201ENST00000265745 KARSQ15046 597 aaKnown RBP10.61□□□□□ -0.71
VPS41-201ENST00000265745 PTPAQ15257 358 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 ZBTB6Q15916 424 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
VPS41-201ENST00000265745 SIX5Q8N196 739 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 MYCT1Q8N699 235 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 FLCNQ8NFG4 579 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 RAD54LQ92698 747 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 SUSD3Q96L08 255 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 RPP25Q9BUL9 199 aaKnown RBP10.61□□□□□ -0.71
VPS41-201ENST00000265745 CCSER1Q9C0I3 900 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 PARVGQ9HBI0 331 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 DNMT3BQ9UBC3 853 aaKnown RBP10.61□□□□□ -0.71
VPS41-201ENST00000265745 NUB1Q9Y5A7 615 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 ARID2Q68CP9 1835 aa10.61□□□□□ -0.71
VPS41-201ENST00000265745 A0A0B4J269 797 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 VPS37CA5D8V6 355 aaPredicted RBP10.6□□□□□ -0.71
VPS41-201ENST00000265745 KRBA1A5PL33 1030 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 HNRNPDLO14979 420 aaKnown RBP10.6□□□□□ -0.71
VPS41-201ENST00000265745 FAM189A1O60320 539 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 FAM13AO94988 1023 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 PIGRP01833 764 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 ADRB2P07550 413 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 CFHP08603 1231 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 CXCL8P10145 99 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 AOC1P19801 751 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 ROR1Q01973 937 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 KYAT1Q16773 422 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 CWF19L1Q69YN2 538 aaKnown RBP10.6□□□□□ -0.71
VPS41-201ENST00000265745 PARM1Q6UWI2 310 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 USP49Q70CQ1 688 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 ST13P5Q8NFI4 369 aaPredicted RBP10.6□□□□□ -0.71
VPS41-201ENST00000265745 ITFG1Q8TB96 612 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 ATOH1Q92858 354 aaPredicted RBP10.6□□□□□ -0.71
VPS41-201ENST00000265745 FGF13Q92913 245 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 BICD1Q96G01 975 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 POM121Q96HA1 1249 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 EPSTI1Q96J88 318 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 FIZ1Q96SL8 496 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 ADAM33Q9BZ11 813 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 HCFC1R1Q9NWW0 138 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 TUBGCP4Q9UGJ1 667 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 FBXL5Q9UKA1 691 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 KCNH3Q9ULD8 1083 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 POLIQ9UNA4 740 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 CLIC4Q9Y696 253 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 NUMBLQ9Y6R0 609 aa10.6□□□□□ -0.71
VPS41-201ENST00000265745 ARHGEF37A1IGU5 675 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 WDR27A2RRH5 827 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 LACTBL1A8MY62 500 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 H7C4K7 107 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 KRT18P05783 430 aaKnown RBP10.59□□□□□ -0.71
VPS41-201ENST00000265745 ATF2P15336 505 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 CYP3A5P20815 502 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 SYT1P21579 422 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 MARCKSP29966 332 aaPredicted RBP10.59□□□□□ -0.71
VPS41-201ENST00000265745 LRPAP1P30533 357 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 ELF1P32519 619 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 MCM4P33991 863 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 TNFSF9P41273 254 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 MATR3P43243 847 aaKnown RBP eCLIP10.59□□□□□ -0.71
VPS41-201ENST00000265745 LIG4P49917 911 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 PRSS12P56730 875 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 GTF2BQ00403 316 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 SPAG1Q07617 926 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 RESTQ13127 1097 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 ENOX2Q16206 610 aaKnown RBP10.59□□□□□ -0.71
VPS41-201ENST00000265745 CTXN3Q4LDR2 81 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 PABPC1LQ4VXU2 614 aaKnown RBP10.59□□□□□ -0.71
VPS41-201ENST00000265745 SPECC1Q5M775 1068 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 ZBTB41Q5SVQ8 909 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 TPGS2Q68CL5 300 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 SLC39A4Q6P5W5 647 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 TCEAL8Q8IYN2 117 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 TMEM130Q8N3G9 435 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 APPL2Q8NEU8 664 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 RASSF8Q8NHQ8 419 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 GPR152Q8TDT2 470 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 LARP4BQ92615 738 aaKnown RBP10.59□□□□□ -0.71
VPS41-201ENST00000265745 FGF14Q92915 247 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 INTS4Q96HW7 963 aaKnown RBP10.59□□□□□ -0.71
VPS41-201ENST00000265745 TSPAN18Q96SJ8 248 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 ZHX3Q9H4I2 956 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 AVENQ9NQS1 362 aaPredicted RBP10.59□□□□□ -0.71
VPS41-201ENST00000265745 SLC2A4RGQ9NR83 387 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 FAM86C1Q9NVL1 165 aa10.59□□□□□ -0.71
VPS41-201ENST00000265745 FBXO2Q9UK22 296 aaPredicted RBP10.59□□□□□ -0.71
VPS41-201ENST00000265745 SRPRBQ9Y5M8 271 aaKnown RBP10.59□□□□□ -0.71
VPS41-201ENST00000265745 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.59□□□□□ -0.71
VPS41-201ENST00000265745 MYO10Q9HD67 2058 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms