RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PIH1D3Q9NQM4 214 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 CYP39A1Q9NYL5 469 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 ADGRA3Q8IWK6 1321 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 USP42Q9H9J4 1324 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 CEP250Q9BV73 2442 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 CD151P48509 253 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 SYCP2LQ5T4T6 812 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 RNF220Q5VTB9 566 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 BBOX1O75936 387 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 BRAFP15056 766 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 CASP2P42575 452 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 HIF1AQ16665 826 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 TRAPPC11Q7Z392 1133 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 MCPH1Q8NEM0 835 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 CNOT8Q9UFF9 292 aaKnown RBP5.99□□□□□ -1.45
VCAN-201ENST00000265077 DAPK2Q9UIK4 370 aa5.99□□□□□ -1.45
VCAN-201ENST00000265077 ABCC3O15438 1527 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TTC26A0AVF1 554 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 CFLARO15519 480 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 HSPA4LO95757 839 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 CARSP49589 748 aaKnown RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 ARFIP2P53365 341 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 EPHB1P54762 984 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 HIC1Q14526 733 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 CNKSR1Q969H4 720 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 PIGSQ96S52 555 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 PRPF18Q99633 342 aaKnown RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 GOLPH3LQ9H4A5 285 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 PKD2L2Q9NZM6 624 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 PI4KBQ9UBF8 816 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TMEM191CA6NGB0 347 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 SLC16A3O15427 465 aaKnown RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 DAB2P98082 770 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TSC22D1Q15714 1073 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 C6orf183Q5T699 404 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 ASPSCR1Q9BZE9 553 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 ROPN1BQ9BZX4 212 aaPredicted RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 ROPN1Q9HAT0 212 aaPredicted RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 FAM153AQ9UHL3 310 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 DTNAQ9Y4J8 743 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 INO80B-WBP1J3KQ70 363 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 LPXNO60711 386 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 ASMTLO95671 621 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TRIP13Q15645 432 aaPredicted RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 KRT27Q7Z3Y8 459 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 XXYLT1Q8NBI6 393 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 GIMAP8Q8ND71 665 aaPredicted RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 TTC8Q8TAM2 541 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 INO80BQ9C086 356 aaPredicted RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 PAIP1Q9H074 479 aaKnown RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 GIN1Q9NXP7 522 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 SNX5Q9Y5X3 404 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 UBE4BO95155 1302 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 DNALI1O14645 258 aaPredicted RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 VDRP11473 427 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 IST1P53990 364 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TBCCQ15814 346 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 POTEAQ6S8J7 498 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 ARHGAP27Q6ZUM4 889 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 SIX6OS1Q8N1H7 587 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 OR9Q1Q8NGQ5 310 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 RSPH1Q8WYR4 309 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 NSL1Q96IY1 281 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 STK33Q9BYT3 514 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TRPV6Q9H1D0 765 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 NOL6Q9H6R4 1146 aaKnown RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 TBCCD1Q9NVR7 557 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 ADD3Q9UEY8 706 aaKnown RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 CLIC2O15247 247 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 S100A5P33763 92 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 FOXD4Q12950 439 aaPredicted RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 TRIM25Q14258 630 aaKnown RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 DRAP1Q14919 205 aaPredicted RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 TRMT5Q32P41 509 aaKnown RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 RFX8Q6ZV50 586 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 ERICH1Q86X53 443 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 DCLK2Q8N568 766 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 MSTO1Q9BUK6 570 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 RRN3Q9NYV6 651 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 DCTN4Q9UJW0 460 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 DNAJC12Q9UKB3 198 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 PALLDQ8WX93 1383 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 WDR64B1ANS9 1081 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 M0R3G1 203 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 OPLAHO14841 1288 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 MAP3K10Q02779 954 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 LRRC14Q15048 493 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TRIM65Q6PJ69 517 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.98□□□□□ -1.45
VCAN-201ENST00000265077 MOSPD1Q9UJG1 213 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 IPPQ9Y573 584 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 SPTBN1Q01082 2364 aaKnown RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 A8MXQ7 604 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 H3BRJ5 948 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 BMP3P12645 472 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 CCND2P30279 289 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 JAK3P52333 1124 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 ARMCX2Q7L311 632 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 STX12Q86Y82 276 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TRIM59Q8IWR1 403 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms