RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 SMYD4Q8IYR2 804 aaPredicted RBP13.55□□□□□ -0.24
CLNS1A-201ENST00000263309 GLIS3Q8NEA6 775 aa13.55□□□□□ -0.24
CLNS1A-201ENST00000263309 GPT2Q8TD30 523 aa13.55□□□□□ -0.24
CLNS1A-201ENST00000263309 MFSD14AQ96MC6 490 aa13.55□□□□□ -0.24
CLNS1A-201ENST00000263309 CGRRF1Q99675 332 aa13.55□□□□□ -0.24
CLNS1A-201ENST00000263309 FGFBP2Q9BYJ0 223 aa13.55□□□□□ -0.24
CLNS1A-201ENST00000263309 TTYH1Q9H313 450 aaPredicted RBP13.55□□□□□ -0.24
CLNS1A-201ENST00000263309 INTS13Q9NVM9 706 aa13.55□□□□□ -0.24
CLNS1A-201ENST00000263309 AGAP1Q9UPQ3 857 aa13.55□□□□□ -0.24
CLNS1A-201ENST00000263309 CTNND2Q9UQB3 1225 aa13.55□□□□□ -0.24
CLNS1A-201ENST00000263309 MICAL3Q7RTP6 2002 aa13.55□□□□□ -0.24
CLNS1A-201ENST00000263309 COL4A6Q14031 1691 aa13.55□□□□□ -0.24
CLNS1A-201ENST00000263309 TTC3P53804 2025 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 BECN2A8MW95 431 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 TISP43B9A030 160 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 CTSAP10619 480 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 CDK11BP21127 795 aaKnown RBP13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 ELF1P32519 619 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 TNNC1P63316 161 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 SPAG1Q07617 926 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 SGSM1Q2NKQ1 1148 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 CBWD2Q8IUF1 395 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 LRRC52Q8N7C0 313 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 GSTCDQ8NEC7 633 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 GDPD5Q8WTR4 605 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 MYLIPQ8WY64 445 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 TAF4BQ92750 862 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 SRRTQ9BXP5 876 aaKnown RBP13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 PDE11AQ9HCR9 933 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 DMAC2Q9NW81 257 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 TCHHQ07283 1943 aa13.54□□□□□ -0.24
CLNS1A-201ENST00000263309 MUC3AQ02505 3323 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 KPNA7A9QM74 516 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 GRM6O15303 877 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 ITGB3P05106 788 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 HOXD13P35453 343 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 BFSP1Q12934 665 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 ZBTB6Q15916 424 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 PLPP4Q5VZY2 271 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 C9orf57Q5W0N0 161 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 CRELD2Q6UXH1 353 aaPredicted RBP13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 DPH6Q7L8W6 267 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 TTC39CQ8N584 583 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 MRPL43Q8N983 215 aaKnown RBP13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 PARD3BQ8TEW8 1205 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 PPM1EQ8WY54 764 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 RIN2Q8WYP3 895 aaPredicted RBP13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 C18orf25Q96B23 403 aaPredicted RBP13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 MMS19Q96T76 1030 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 HERC2P3Q9BVR0 1158 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 HAPLN2Q9GZV7 340 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 IGFLR1Q9H665 355 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 COG5Q9UP83 839 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 SIP14410 1827 aa13.53□□□□□ -0.24
CLNS1A-201ENST00000263309 PPP1R3GB7ZBB8 358 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 RFXAPO00287 272 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 C2CD2LO14523 706 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 CYB561D2O14569 222 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 FAM189A1O60320 539 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 C1RP00736 705 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 NFICP08651 508 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 FAM163BP0C2L3 166 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 PBX3P40426 434 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 MTIF2P46199 727 aaKnown RBP13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 AFF1P51825 1210 aaKnown RBP13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 STX17P56962 302 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 MYL7Q01449 175 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 YWHAHQ04917 246 aaPredicted RBP13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 DCAF17Q5H9S7 520 aaPredicted RBP13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 ZBTB41Q5SVQ8 909 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 KRT39Q6A163 491 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 ZNF280DQ6N043 979 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 TRAPPC11Q7Z392 1133 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 TMEM86AQ8N2M4 240 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 HPDLQ96IR7 371 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 FAM81BQ96LP2 452 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 ZMAT2Q96NC0 199 aaKnown RBP13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 SNX25Q9H3E2 840 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 FNIP2Q9P278 1114 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 MAFFQ9ULX9 164 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 PCDHB8Q9UN66 801 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 MTCH2Q9Y6C9 303 aa13.52□□□□□ -0.25
CLNS1A-201ENST00000263309 TET1Q8NFU7 2136 aa13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 PES1O00541 588 aaKnown RBP13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 PIRO00625 290 aa13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 CSPG5O95196 566 aa13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 POLR2BP30876 1174 aaKnown RBP13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 PIK3CAP42336 1068 aa13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 LHX1P48742 406 aa13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 NDUFV1P49821 464 aa13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 LILRA4P59901 499 aa13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 YWHAEP62258 255 aaKnown RBP13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 DSG1Q02413 1049 aa13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 SMARCB1Q12824 385 aa13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 CCDC85BQ15834 202 aaPredicted RBP13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 PUS10Q3MIT2 529 aaKnown RBP13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 DCP1BQ8IZD4 617 aaKnown RBP13.51□□□□□ -0.25
CLNS1A-201ENST00000263309 MAFAQ8NHW3 353 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms