RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 EXOC3L1Q86VI1 746 aa17.08■□□□□ 0.33
SREBF1-201ENST00000261646 TBC1D10AQ9BXI6 508 aa17.08■□□□□ 0.33
SREBF1-201ENST00000261646 IL17RBQ9NRM6 502 aa17.08■□□□□ 0.33
SREBF1-201ENST00000261646 CYP39A1Q9NYL5 469 aa17.08■□□□□ 0.33
SREBF1-201ENST00000261646 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.08■□□□□ 0.335e-6■■■□□ 15.4
SREBF1-201ENST00000261646 KRT10P13645 584 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 PTDSS1P48651 473 aaKnown RBP17.08■□□□□ 0.32
SREBF1-201ENST00000261646 PEX5P50542 639 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 SLC30A10Q6XR72 485 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 MAGEC3Q8TD91 643 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 SLC35C1Q96A29 364 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 TLK1Q9UKI8 766 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 MON2Q7Z3U7 1717 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 GIPC1O14908 333 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 SUPT3HO75486 399 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 MYL2P10916 166 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 MMP13P45452 471 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 OSTNP61366 133 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 STX3Q13277 289 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 SPOPLQ6IQ16 392 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 MCF2L2Q86YR7 1114 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 TTYH3Q9C0H2 523 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 TRPV6Q9H1D0 765 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 SCAF8Q9UPN6 1271 aaKnown RBP17.08■□□□□ 0.32
SREBF1-201ENST00000261646 MST1RQ04912 1400 aa17.08■□□□□ 0.32
SREBF1-201ENST00000261646 TLR2O60603 784 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 CYLC2Q14093 348 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-201ENST00000261646 HESX1Q9UBX0 185 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 DAGLAQ9Y4D2 1042 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 F5H423 210 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-201ENST00000261646 K7ERI5 159 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 MGRN1O60291 552 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 SLURP2P0DP57 97 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 P4HA1P13674 534 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 IRGCQ6NXR0 463 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 ZBTB33Q86T24 672 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 PAGR1Q9BTK6 254 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 NUDT17P0C025 328 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 PSMC6P62333 389 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 SLC34A1Q06495 639 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 NBPF20Q3BBV1 942 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 GALNT4Q8N4A0 578 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 MCUQ8NE86 351 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 DCAF4Q8WV16 495 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 SLC7A3Q8WY07 619 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 KIAA1683Q9H0B3 1180 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 PAIP2BQ9ULR5 123 aaKnown RBP17.07■□□□□ 0.32
SREBF1-201ENST00000261646 ARHGAP23Q9P227 1491 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 CALB1P05937 261 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 GEMIN4P57678 1058 aaKnown RBP17.07■□□□□ 0.32
SREBF1-201ENST00000261646 ZNF200P98182 395 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-201ENST00000261646 DUPD1Q68J44 220 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 C16orf87Q6PH81 154 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 POP1Q99575 1024 aaKnown RBP17.07■□□□□ 0.32
SREBF1-201ENST00000261646 PFDN4Q9NQP4 134 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 ADA2Q9NZK5 511 aa17.07■□□□□ 0.32
SREBF1-201ENST00000261646 AHCYL1O43865 530 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 ROR2Q01974 943 aaKnown RBP17.06■□□□□ 0.32
SREBF1-201ENST00000261646 RIPK1Q13546 671 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 TFDP2Q14188 446 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 MTFR1Q15390 333 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 TMEM259Q4ZIN3 620 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 HGSNATQ68CP4 663 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 LRRC74BQ6ZQY2 392 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 SESTD1Q86VW0 696 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 C1orf131Q8NDD1 294 aaKnown RBP17.06■□□□□ 0.32
SREBF1-201ENST00000261646 PI4K2AQ9BTU6 479 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 DRC3Q9H069 523 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 PARVAQ9NVD7 372 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 CENPCQ03188 943 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 FUT2Q10981 343 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 RRP1BQ14684 758 aaKnown RBP17.06■□□□□ 0.32
SREBF1-201ENST00000261646 GRIK5Q16478 980 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 RCOR2Q8IZ40 523 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 SLC25A41Q8N5S1 370 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 MSTO1Q9BUK6 570 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 C21orf2O43822 256 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 P4HBP07237 508 aaKnown RBP17.06■□□□□ 0.32
SREBF1-201ENST00000261646 ZBTB8OSQ8IWT0 167 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 SCUBE1Q8IWY4 988 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 ACSF2Q96CM8 615 aaPredicted RBP17.06■□□□□ 0.32
SREBF1-201ENST00000261646 NINJ2Q9NZG7 142 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 RIC1Q4ADV7 1423 aa17.06■□□□□ 0.32
SREBF1-201ENST00000261646 PECAM1P16284 738 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-201ENST00000261646 TAL1P17542 331 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-201ENST00000261646 QARSP47897 775 aaKnown RBP17.05■□□□□ 0.32
SREBF1-201ENST00000261646 EIF3EP60228 445 aaKnown RBP17.05■□□□□ 0.32
SREBF1-201ENST00000261646 JADE1Q6IE81 842 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 C16orf86Q6ZW13 317 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 OPTNQ96CV9 577 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 SLCO1B3Q9NPD5 702 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 KRT7P08729 469 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 MMP10P09238 476 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 MCF2P10911 925 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 CRKP46108 304 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 SPDYCQ5MJ68 293 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 ENOSF1Q7L5Y1 443 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 E2F7Q96AV8 911 aa17.05■□□□□ 0.32
SREBF1-201ENST00000261646 FAM149B1Q96BN6 582 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms