RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 JAMLQ86YT9 394 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 RTKN2Q8IZC4 609 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 COX4I2Q96KJ9 171 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 BTBD10Q9BSF8 475 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 ISCA1Q9BUE6 129 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 FADS3Q9Y5Q0 445 aa13.67□□□□□ -0.22
TMEM260-201ENST00000261556 CPSF1Q10570 1443 aaKnown RBP13.66□□□□□ -0.22
TMEM260-201ENST00000261556 TNS3Q68CZ2 1445 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 SH2B2O14492 632 aaPredicted RBP13.66□□□□□ -0.22
TMEM260-201ENST00000261556 CHEK2O96017 543 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 ENO2P09104 434 aaPredicted RBP13.66□□□□□ -0.22
TMEM260-201ENST00000261556 KRT76Q01546 638 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 OCA2Q04671 838 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 PARP6Q2NL67 630 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 ODR4Q5SWX8 454 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 EGFLAMQ63HQ2 1017 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 C4orf50Q6ZRC1 276 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 NEK10Q6ZWH5 1172 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 CTAGE3PQ8IX95 158 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 METTL14Q9HCE5 456 aaKnown RBP13.66□□□□□ -0.22
TMEM260-201ENST00000261556 PTTG2Q9NZH5 202 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 PIM2Q9P1W9 311 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 E9PCH4 1651 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 CYP2D6P10635 497 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 NELFEP18615 380 aaKnown RBP13.66□□□□□ -0.22
TMEM260-201ENST00000261556 RXRGP48443 463 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 CHN2P52757 468 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 NFIXQ14938 502 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 MAPK11Q15759 364 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 TBC1D10BQ4KMP7 808 aaPredicted RBP13.66□□□□□ -0.22
TMEM260-201ENST00000261556 LPCAT4Q643R3 524 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 RFWD2Q8NHY2 731 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 GDPD5Q8WTR4 605 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 INPP5DQ92835 1189 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 SRPK1Q96SB4 655 aaKnown RBP13.66□□□□□ -0.22
TMEM260-201ENST00000261556 GPATCH1Q9BRR8 931 aaKnown RBP13.66□□□□□ -0.22
TMEM260-201ENST00000261556 TRPM1Q7Z4N2 1603 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 K7ENM7 598 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 KLHL41O60662 606 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 MFN2O95140 757 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 DLATP10515 647 aaKnown RBP13.66□□□□□ -0.22
TMEM260-201ENST00000261556 GUCY1A2P33402 732 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 STAT1P42224 750 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 LIG4P49917 911 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 EXOSC10Q01780 885 aaKnown RBP13.66□□□□□ -0.22
TMEM260-201ENST00000261556 PDAP1Q13442 181 aaKnown RBP13.66□□□□□ -0.22
TMEM260-201ENST00000261556 FAM83BQ5T0W9 1011 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 LIN9Q5TKA1 542 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 EEPD1Q7L9B9 569 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 CROCCP3Q8IVE0 287 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 EBF3Q9H4W6 596 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 NRDE2Q9H7Z3 1164 aa13.66□□□□□ -0.22
TMEM260-201ENST00000261556 DDX3XO00571 662 aaKnown RBP eCLIP13.65□□□□□ -0.22
TMEM260-201ENST00000261556 GH2P01242 217 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 SPATA31D3P0C874 917 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 NCF2P19878 526 aaPredicted RBP13.65□□□□□ -0.22
TMEM260-201ENST00000261556 TNFRSF8P28908 595 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 LONP1P36776 959 aaKnown RBP13.65□□□□□ -0.22
TMEM260-201ENST00000261556 ECE1P42892 770 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 MMP13P45452 471 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 KLHL35Q6PF15 583 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 SPATA31D4Q6ZUB0 917 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 SLC44A5Q8NCS7 719 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 OR6Y1Q8NGX8 325 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 ZNF317Q96PQ6 595 aaPredicted RBP13.65□□□□□ -0.22
TMEM260-201ENST00000261556 LRMDAQ9H2I8 198 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 ANPEPP15144 967 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 CREB1P16220 341 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 PORP16435 677 aaPredicted RBP13.65□□□□□ -0.22
TMEM260-201ENST00000261556 ADRA2BP18089 450 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 ACSBG2Q5FVE4 666 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 CCDC137Q6PK04 289 aaKnown RBP13.65□□□□□ -0.22
TMEM260-201ENST00000261556 ZBTB8OSQ8IWT0 167 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 DHTKD1Q96HY7 919 aaPredicted RBP13.65□□□□□ -0.22
TMEM260-201ENST00000261556 ANKRD36BP1Q96IX9 119 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 TRABDQ9H4I3 376 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 ALKQ9UM73 1620 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 CCDC195A0A1B0GUA6 201 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 ZNF200P98182 395 aaPredicted RBP13.65□□□□□ -0.22
TMEM260-201ENST00000261556 NR1D2Q14995 579 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 FASTKD5Q7L8L6 764 aaKnown RBP13.65□□□□□ -0.22
TMEM260-201ENST00000261556 MAGEB18Q96M61 343 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 CPVLQ9H3G5 476 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 PCDHA4Q9UN74 947 aa13.65□□□□□ -0.22
TMEM260-201ENST00000261556 ZBTB11O95625 1053 aaPredicted RBP13.64□□□□□ -0.23
TMEM260-201ENST00000261556 SRGAP2CP0DJJ0 459 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 SRGAP2BP0DMP2 458 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 TRAPPC10P48553 1259 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 TRIM28Q13263 835 aaKnown RBP13.64□□□□□ -0.23
TMEM260-201ENST00000261556 PODNQ7Z5L7 613 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 SH3RF3Q8TEJ3 882 aaPredicted RBP13.64□□□□□ -0.23
TMEM260-201ENST00000261556 RNPEPQ9H4A4 650 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 ANKFY1Q9P2R3 1169 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 AK5Q9Y6K8 562 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 ANKRD40Q6AI12 368 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 ADSSL1Q8N142 457 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 TIMMDC1Q9NPL8 285 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 HNRNPCL1O60812 293 aaKnown RBP13.64□□□□□ -0.23
TMEM260-201ENST00000261556 DAB1O75553 588 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms