RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 MMGT1Q8N4V1 131 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 VAT1Q99536 393 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 SPATA16Q9BXB7 569 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 GANQ9H2C0 597 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 SNX12Q9UMY4 172 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 SPECC1L-ADORA2AF8WAN1 911 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 PAEPP09466 180 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 AP2B1P63010 937 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 PURAQ00577 322 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 KRT17Q04695 432 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 AP1B1Q10567 949 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 RARS2Q5T160 578 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 RAET1EQ8TD07 263 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 CELF1Q92879 486 aaKnown RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 DYNLL2Q96FJ2 89 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 PSMC3IPQ9P2W1 217 aaPredicted RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 MRC1P22897 1456 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 HACD1B0YJ81 288 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 BMP10O95393 424 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 VCLP18206 1134 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 MAPK8P45983 427 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 PLTPP55058 493 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 CDK16Q00536 496 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 ST13P4Q8IZP2 240 aaPredicted RBP4.54□□□□□ -1.68
VPS13C-202ENST00000261517 STX19Q8N4C7 294 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 VPS37AQ8NEZ2 397 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 AXIN2Q9Y2T1 843 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 ROBO3Q96MS0 1386 aa4.54□□□□□ -1.68
VPS13C-202ENST00000261517 TRPC5OSA6NMA1 111 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 IRX1P78414 480 aaPredicted RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 GRIN1Q05586 938 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 ZNF235Q14590 738 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 TMEM132BQ14DG7 1078 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 ADRM1Q16186 407 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 SPOPLQ6IQ16 392 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 C16orf89Q6UX73 402 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 ATP6V0D2Q8N8Y2 350 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 DCUN1D1Q96GG9 259 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 ATP6V1G3Q96LB4 118 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 SERPINB12Q96P63 405 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 SH3GL1Q99961 368 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 UBE2OQ9C0C9 1292 aaKnown RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 NFASCO94856 1347 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 PALMO75781 387 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 HSPA9P38646 679 aaKnown RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 PMS2P54278 862 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 MAPK8IP2Q13387 824 aaPredicted RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 CDC42EP5Q6NZY7 148 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 SRP68Q9UHB9 627 aaKnown RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 TTLL3Q9Y4R7 772 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 IPPQ9Y573 584 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 BTNL10A8MVZ5 291 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 POTECB2RU33 542 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 VPS4BO75351 444 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 NR3C2P08235 984 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 TXNP10599 105 aaKnown RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 CAP2P40123 477 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 SERPINB10P48595 397 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 PSEN1P49768 467 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 GUCY2FP51841 1108 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 BCAT1P54687 386 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 TPI1P60174 286 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 C1QBPQ07021 282 aaKnown RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 EPHA10Q5JZY3 1008 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 AGGF1Q8N302 714 aaeCLIP4.53□□□□□ -1.681e-8■■■■■ 43.4
VPS13C-202ENST00000261517 CFAP61Q8NHU2 1237 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 FAM167BQ9BTA0 163 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 RIC8BQ9NVN3 520 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 CHMP2BQ9UQN3 213 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 MYH9P35579 1960 aaKnown RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 SYCE1LA8MT33 242 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 OGTO15294 1046 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 SPAG7O75391 227 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 RTN3O95197 1032 aaPredicted RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 AIF1P55008 147 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 BACE1P56817 501 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 TMEM86AQ8N2M4 240 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 MKL1Q969V6 931 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 NOP53Q9NZM5 478 aaKnown RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 RNF181Q9P0P0 153 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 TPX2Q9ULW0 747 aaKnown RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 ITGA4P13612 1032 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 TGM2P21980 687 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 SPRP35270 261 aaPredicted RBP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 INPP5AQ14642 412 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 TRIM67Q6ZTA4 783 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 BANK1Q8NDB2 785 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 SPATA18Q8TC71 538 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 DNAJC7Q99615 494 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 SLC39A8Q9C0K1 460 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 M0QYV0 167 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 MCF2P10911 925 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 ST8SIA6P61647 398 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 TGM3Q08188 693 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 ATF7IP2Q5U623 682 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 DDX42Q86XP3 938 aaKnown RBP eCLIP4.53□□□□□ -1.68
VPS13C-202ENST00000261517 USP38Q8NB14 1042 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 LRRC39Q96DD0 335 aa4.53□□□□□ -1.68
VPS13C-202ENST00000261517 STAMBPL1Q96FJ0 436 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms