RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 EPHX2P34913 555 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 ATP1A2P50993 1020 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 IRAK1P51617 712 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 MYL6P60660 151 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 OSTNP61366 133 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 GJC2Q5T442 439 aaPredicted RBP23.12■■□□□ 1.29
CLN6-201ENST00000249806 CENPHQ9H3R5 247 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 ADAM22Q9P0K1 906 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 ATP8A1Q9Y2Q0 1164 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 PTPN22Q9Y2R2 807 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 PPME1Q9Y570 386 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 ASS1P00966 412 aaKnown RBP23.12■■□□□ 1.29
CLN6-201ENST00000249806 CLCN3P51790 818 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 EFCAB12Q6NXP0 572 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 USP50Q70EL3 339 aaPredicted RBP23.12■■□□□ 1.29
CLN6-201ENST00000249806 THNSL1Q8IYQ7 743 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 IMPG2Q9BZV3 1241 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 RNPEPQ9H4A4 650 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 MROH8Q9H579 483 aa23.12■■□□□ 1.29
CLN6-201ENST00000249806 CPSF3Q9UKF6 684 aaKnown RBP23.12■■□□□ 1.29
CLN6-201ENST00000249806 COILP38432 576 aaPredicted RBP23.11■■□□□ 1.29
CLN6-201ENST00000249806 MCL1Q07820 350 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 ZNF844Q08AG5 666 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 CYP1B1Q16678 543 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 ZDHHC24Q6UX98 284 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 LRIG3Q6UXM1 1119 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 CCDC105Q8IYK2 499 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 CEP120Q8N960 986 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 FBXO25Q8TCJ0 367 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 ZNF606Q8WXB4 792 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 TRIM11Q96F44 468 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 ATP6V1G3Q96LB4 118 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 SMARCAD1Q9H4L7 1026 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 MTUS1Q9ULD2 1270 aa23.11■■□□□ 1.29
CLN6-201ENST00000249806 INO80B-WBP1J3KQ70 363 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 GAS2O43903 313 aaKnown RBP23.1■■□□□ 1.29
CLN6-201ENST00000249806 CD58P19256 250 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 RPL21P46778 160 aaKnown RBP23.1■■□□□ 1.29
CLN6-201ENST00000249806 SKIDA1Q1XH10 827 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 ZNF394Q53GI3 561 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 DPY19L2Q6NUT2 758 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 MMS22LQ6ZRQ5 1243 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 SYT17Q9BSW7 474 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 INO80BQ9C086 356 aaPredicted RBP23.1■■□□□ 1.29
CLN6-201ENST00000249806 MINDY3Q9H8M7 445 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 TMBIM4Q9HC24 238 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 RASAL2Q9UJF2 1139 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 O00370 1275 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 GJB6O95452 261 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 DRG2P55039 364 aaKnown RBP23.1■■□□□ 1.29
CLN6-201ENST00000249806 TFAMQ00059 246 aaKnown RBP23.1■■□□□ 1.29
CLN6-201ENST00000249806 EAPPQ56P03 285 aaPredicted RBP23.1■■□□□ 1.29
CLN6-201ENST00000249806 GRHL1Q9NZI5 618 aa23.1■■□□□ 1.29
CLN6-201ENST00000249806 GNGT1P63211 74 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 IGBP1P78318 339 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 SKOR1P84550 965 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 MAMLD1Q13495 774 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 MTMR3Q13615 1198 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 TTLL4Q14679 1199 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 DUOXA2Q1HG44 320 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 ARMC9Q7Z3E5 817 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 C1orf54Q8WWF1 131 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 HERPUD2Q9BSE4 406 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 TXLNGYQ9BZA5 131 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 LRRC4CQ9HCJ2 640 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 PTPRHQ9HD43 1115 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 FSCN2O14926 492 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 MGAMO43451 1857 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 PPFIA2O75334 1257 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 CSDE1O75534 798 aaKnown RBP23.09■■□□□ 1.29
CLN6-201ENST00000249806 IQCF3P0C7M6 154 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 AP3M2P53677 418 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 PTP4A2Q12974 167 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 ATF7IP2Q5U623 682 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 EEF1DP3Q658K8 133 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 TRIM72Q6ZMU5 477 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 TSHZ1Q6ZSZ6 1077 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 EXOC8Q8IYI6 725 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 UBR7Q8N806 425 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 ZC3H15Q8WU90 426 aaKnown RBP23.09■■□□□ 1.29
CLN6-201ENST00000249806 C2orf40Q9H1Z8 148 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 FZD8Q9H461 694 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 RABEP2Q9H5N1 569 aa23.09■■□□□ 1.29
CLN6-201ENST00000249806 GOLGA6L10A6NI86 522 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 ACKR2O00590 384 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 PODXLO00592 558 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 HBP1O60381 514 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 HOXC6P09630 235 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 WEE2P0C1S8 567 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 MYZAPP0CAP1 466 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 PROZP22891 400 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 ZNF132P52740 706 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 GRM1Q13255 1194 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 TMEM132AQ24JP5 1023 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 LIN9Q5TKA1 542 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 MPZL3Q6UWV2 235 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 ARMCX2Q7L311 632 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 PHF13Q86YI8 300 aaPredicted RBP23.08■■□□□ 1.29
CLN6-201ENST00000249806 EFCAB13Q8IY85 973 aa23.08■■□□□ 1.29
CLN6-201ENST00000249806 GRIN2DO15399 1336 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms