RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 MRFAP1Q9Y605 127 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 DUSP10Q9Y6W6 482 aa15.22■□□□□ 0.03
SDF2-201ENST00000247020 XPOTO43592 962 aaKnown RBP15.21■□□□□ 0.03
SDF2-201ENST00000247020 RTN2O75298 545 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 SLU7O95391 586 aaKnown RBP15.21■□□□□ 0.03
SDF2-201ENST00000247020 P4HA1P13674 534 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 CHRNB2P17787 502 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 ZNF132P52740 706 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 FMO1Q01740 532 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 XKR4Q5GH76 650 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 ZNF667Q5HYK9 610 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 FAM26DQ5JW98 314 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 PAPD7Q5XG87 772 aaKnown RBP15.21■□□□□ 0.03
SDF2-201ENST00000247020 ALKAL1Q6UXT8 129 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 TRIM72Q6ZMU5 477 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 CXorf38Q8TB03 319 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 UBE2Q2Q8WVN8 375 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 CTNNBL1Q8WYA6 563 aaPredicted RBP15.21■□□□□ 0.03
SDF2-201ENST00000247020 FAM84AQ96KN4 292 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 BEGAINQ9BUH8 593 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 EIF2AQ9BY44 585 aaKnown RBP15.21■□□□□ 0.03
SDF2-201ENST00000247020 BCO2Q9BYV7 579 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 SNTG2Q9NY99 539 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 SIX4Q9UIU6 781 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 TSKSQ9UJT2 592 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 NOC2LQ9Y3T9 749 aaKnown RBP15.21■□□□□ 0.03
SDF2-201ENST00000247020 PCDHB4Q9Y5E5 795 aa15.21■□□□□ 0.03
SDF2-201ENST00000247020 GPR182O15218 404 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 RPS6KA5O75582 802 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 GALCP54803 685 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 HADHBP55084 474 aaKnown RBP15.2■□□□□ 0.02
SDF2-201ENST00000247020 RBP5P82980 135 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 ZBTB6Q15916 424 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 UBXN11Q5T124 520 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 USP38Q8NB14 1042 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 SLC43A3Q8NBI5 491 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 SLC20A1Q8WUM9 679 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 RFFLQ8WZ73 363 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 KIF12Q96FN5 646 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 ARID3AQ99856 593 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 PACSIN1Q9BY11 444 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 CYP3A43Q9HB55 503 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.2■□□□□ 0.02
SDF2-201ENST00000247020 DPP3Q9NY33 737 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 CDC23Q9UJX2 597 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 TRIM17Q9Y577 477 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 PTCH2Q9Y6C5 1203 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 CAPN6Q9Y6Q1 641 aa15.2■□□□□ 0.02
SDF2-201ENST00000247020 UQCRHLA0A096LP55 91 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 A0A0U1RQG5 324 aaPredicted RBP15.19■□□□□ 0.02
SDF2-201ENST00000247020 CTIFO43310 598 aaKnown RBP15.19■□□□□ 0.02
SDF2-201ENST00000247020 MOCS3O95396 460 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 CHRNA1P02708 482 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 ITGB3P05106 788 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 UQCRHP07919 91 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 KCNE1P15382 129 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 PRLRP16471 622 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 ASPAP45381 313 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 HTRA3P83110 453 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 AMPD2Q01433 879 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 TMEM270Q6UE05 265 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 FAM43BQ6ZT52 329 aaPredicted RBP15.19■□□□□ 0.02
SDF2-201ENST00000247020 RHOT2Q8IXI1 618 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 HACE1Q8IYU2 909 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 RBBP8NLQ8NC74 664 aaPredicted RBP15.19■□□□□ 0.02
SDF2-201ENST00000247020 BEST2Q8NFU1 509 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 TRAIPQ9BWF2 469 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 SEPT11Q9NVA2 429 aaKnown RBP15.19■□□□□ 0.02
SDF2-201ENST00000247020 SALL4Q9UJQ4 1053 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 UBQLN1Q9UMX0 589 aaKnown RBP15.19■□□□□ 0.02
SDF2-201ENST00000247020 UMODL1Q5DID0 1318 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 RECQL4O94761 1208 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 CLSTN1O94985 981 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 MMEP08473 750 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 KRT19P08727 400 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 CYP3A5P20815 502 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 WHAMMP3Q1A5X7 153 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 LRRC52Q8N7C0 313 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 WNT8BQ93098 351 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.19■□□□□ 0.02
SDF2-201ENST00000247020 NXF3Q9H4D5 531 aaKnown RBP15.19■□□□□ 0.02
SDF2-201ENST00000247020 PHF24Q9UPV7 400 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 NOD1Q9Y239 953 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 IPPQ9Y573 584 aa15.19■□□□□ 0.02
SDF2-201ENST00000247020 A0A1W2PQ45 241 aaPredicted RBP15.18■□□□□ 0.02
SDF2-201ENST00000247020 A0A1W2PQY0 241 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 CD4P01730 458 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 MYCNP04198 464 aaPredicted RBP15.18■□□□□ 0.02
SDF2-201ENST00000247020 GNA15P30679 374 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 POLR2BP30876 1174 aaKnown RBP15.18■□□□□ 0.02
SDF2-201ENST00000247020 RAB27AP51159 221 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 NAP1L1P55209 391 aaKnown RBP15.18■□□□□ 0.02
SDF2-201ENST00000247020 TUBB4BP68371 445 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 MYO1EQ12965 1108 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 CLEC16AQ2KHT3 1053 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 TRIM71Q2Q1W2 868 aaKnown RBP15.18■□□□□ 0.02
SDF2-201ENST00000247020 TWF2Q6IBS0 349 aaKnown RBP15.18■□□□□ 0.02
SDF2-201ENST00000247020 SYCE1Q8N0S2 351 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 CEP112Q8N8E3 955 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 TRIM11Q96F44 468 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms