RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 CCDC50Q8IVM0 306 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 LRRC71Q8N4P6 559 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 TLCD1Q96CP7 247 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 ZBTB10Q96DT7 871 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 TCHPQ9BT92 498 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 ADM5C9JUS6 153 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 ABCD1P33897 745 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 IFI35P80217 286 aaPredicted RBP18.51■□□□□ 0.55
LRFN3-201ENST00000246529 MAMLD1Q13495 774 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 SPDYCQ5MJ68 293 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 RIOX2Q8IUF8 465 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 EPS8L3Q8TE67 593 aaKnown RBP18.51■□□□□ 0.55
LRFN3-201ENST00000246529 FAM81BQ96LP2 452 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 SPATC1LQ9H0A9 340 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 NRBP2Q9NSY0 501 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 DNAJC17Q9NVM6 304 aaKnown RBP18.51■□□□□ 0.55
LRFN3-201ENST00000246529 KLHL11Q9NVR0 708 aa18.51■□□□□ 0.55
LRFN3-201ENST00000246529 PROSCO94903 275 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 MYBL1P10243 752 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 RALAP11233 206 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 CD58P19256 250 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 RFC5P40937 340 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 SSR1P43307 286 aaKnown RBP18.5■□□□□ 0.55
LRFN3-201ENST00000246529 MAGEA9P43362 315 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 ZNF394Q53GI3 561 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 MTMR12Q9C0I1 747 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 PARP2Q9UGN5 583 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 ASIC3Q9UHC3 531 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 KCNG1Q9UIX4 513 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 CD2APQ9Y5K6 639 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 LDHAP00338 332 aaKnown RBP18.5■□□□□ 0.55
LRFN3-201ENST00000246529 GJB1P08034 283 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 EDNRBP24530 442 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 VPS41P49754 854 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 HOOK3Q86VS8 718 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 RAPGEF5Q92565 580 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 TRIM11Q96F44 468 aa18.5■□□□□ 0.55
LRFN3-201ENST00000246529 DDX23Q9BUQ8 820 aaKnown RBP18.5■□□□□ 0.55
LRFN3-201ENST00000246529 RIPK2O43353 540 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 CHKAP35790 457 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 LIG3P49916 1009 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 PTP4A2Q12974 167 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 QPCTQ16769 361 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 HSDL1Q3SXM5 330 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 PWWP2AQ96N64 755 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 PLVAPQ9BX97 442 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 TMEM134Q9H6X4 195 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 PPP2R3BQ9Y5P8 575 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 IRF6O14896 467 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 TRAPPC3O43617 180 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 MAFO75444 373 aaPredicted RBP18.49■□□□□ 0.55
LRFN3-201ENST00000246529 FAM107AO95990 144 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 TCF4P15884 667 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 SLC1A1P43005 524 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 TMEM63BQ5T3F8 832 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 LIN9Q5TKA1 542 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 PRUNE1Q86TP1 453 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 CDR2LQ86X02 465 aaPredicted RBP18.49■□□□□ 0.55
LRFN3-201ENST00000246529 SEPT1Q8WYJ6 367 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 OTUD5Q96G74 571 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 CCDC114Q96M63 670 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 SGIP1Q9BQI5 828 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 DCLK3Q9C098 648 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 ELP3Q9H9T3 547 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 AAASQ9NRG9 546 aa18.49■□□□□ 0.55
LRFN3-201ENST00000246529 WDR90Q96KV7 1748 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 GMNCA6NCL1 334 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 FAM189A1O60320 539 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 MSCO60682 206 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 MYL6P60660 151 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 RPL7AP62424 266 aaKnown RBP18.48■□□□□ 0.55
LRFN3-201ENST00000246529 CALCOCO2Q13137 446 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 ATP13A4Q4VNC1 1196 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 FAM160B1Q5W0V3 765 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 GPC2Q8N158 579 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 TMEM130Q8N3G9 435 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 TRAPPC12Q8WVT3 735 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 TLR3O15455 904 aaKnown RBP18.48■□□□□ 0.55
LRFN3-201ENST00000246529 DDNO94850 711 aaPredicted RBP18.48■□□□□ 0.55
LRFN3-201ENST00000246529 OSTNP61366 133 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 NEDD9Q14511 834 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 MOB2Q70IA6 237 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 B4GALNT4Q76KP1 1039 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 RNF149Q8NC42 400 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 ZNF606Q8WXB4 792 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 CLMNQ96JQ2 1002 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 RUNDC3BQ96NL0 473 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 SELENOSQ9BQE4 189 aa18.48■□□□□ 0.55
LRFN3-201ENST00000246529 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.48■□□□□ 0.55
LRFN3-201ENST00000246529 RARGP13631 454 aa18.47■□□□□ 0.55
LRFN3-201ENST00000246529 BRD2P25440 801 aaKnown RBP18.47■□□□□ 0.55
LRFN3-201ENST00000246529 GBP1P32455 592 aa18.47■□□□□ 0.55
LRFN3-201ENST00000246529 LAMTOR4Q0VGL1 99 aa18.47■□□□□ 0.55
LRFN3-201ENST00000246529 METTL7BQ6UX53 244 aa18.47■□□□□ 0.55
LRFN3-201ENST00000246529 SCARA5Q6ZMJ2 495 aa18.47■□□□□ 0.55
LRFN3-201ENST00000246529 BRSK2Q8IWQ3 736 aa18.47■□□□□ 0.55
LRFN3-201ENST00000246529 KCNN1Q92952 543 aa18.47■□□□□ 0.55
LRFN3-201ENST00000246529 CNTN6Q9UQ52 1028 aa18.47■□□□□ 0.55
LRFN3-201ENST00000246529 PCNTO95613 3336 aa18.47■□□□□ 0.55
LRFN3-201ENST00000246529 PI4K2BG5E9Z4 385 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms