RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 CUL2Q13617 745 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 TMEM132BQ14DG7 1078 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 LIN9Q5TKA1 542 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 HAPLN2Q9GZV7 340 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 SUFUQ9UMX1 484 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 LCTP09848 1927 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 ATP2A1O14983 1001 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 PTPRAP18433 802 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 ACOT2P49753 483 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 NOMO3P69849 1222 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 ATL2Q8NHH9 583 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 VCPIP1Q96JH7 1222 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 SERPINB12Q96P63 405 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 APOBEC3GQ9HC16 384 aaKnown RBP23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 HOMER3Q9NSC5 361 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 MKRN4PQ13434 485 aaPredicted RBP23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 SPRED3Q2MJR0 410 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 C2CD6Q53TS8 623 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 ABRAQ8N0Z2 381 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 ASAP3Q8TDY4 903 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 JPH2Q9BR39 696 aaPredicted RBP23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 ACAD9Q9H845 621 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 R3HDM2Q9Y2K5 976 aaKnown RBP23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 LOC285556D6RIA3 1793 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 SORBS3O60504 671 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 ATP4AP20648 1035 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 ITGA8P53708 1063 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 HMGCS2P54868 508 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 SLFN12LQ6IEE8 588 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 EXOC3L1Q86VI1 746 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 RHOT1Q8IXI2 618 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 CCDC197Q8NCU1 140 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 CCT6BQ92526 530 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 C11orf70Q9BRQ4 267 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 TEX13BQ9BXU2 312 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 PORCNQ9H237 461 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 RBAKQ9NYW8 714 aaPredicted RBP23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 CNTN6Q9UQ52 1028 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 NEU2Q9Y3R4 380 aa23.02■■□□□ 1.28
SH2D3A-201ENST00000245908 DNM1LO00429 736 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 ACSL3O95573 720 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 ATF2P15336 505 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 NAMPTP43490 491 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 CNGA2Q16280 664 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 SAMD7Q7Z3H4 446 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 PIGWQ7Z7B1 504 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 PHF13Q86YI8 300 aaPredicted RBP23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 KATNAL2Q8IYT4 538 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 ZKSCAN4Q969J2 545 aaPredicted RBP23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 TMEM143Q96AN5 459 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 PRMT1Q99873 361 aaKnown RBP23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 TRAIPQ9BWF2 469 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 MAF1Q9H063 256 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 KDM4CQ9H3R0 1056 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 DHX33Q9H6R0 707 aaKnown RBP23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 MRPL47Q9HD33 250 aaKnown RBP23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 PICK1Q9NRD5 415 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 ADAM22Q9P0K1 906 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 PIM2Q9P1W9 311 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 PCDHB4Q9Y5E5 795 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 ZNF541Q9H0D2 1346 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 TTC4O95801 387 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 CFHP08603 1231 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 GHRP10912 638 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 RALAP11233 206 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 GLRA2P23416 452 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 GNA15P30679 374 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 MAMLD1Q13495 774 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 LONRF1Q17RB8 773 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 PLEKHA7Q6IQ23 1121 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 LRRC34Q8IZ02 419 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 CGRRF1Q99675 332 aa23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 MAFBQ9Y5Q3 323 aaPredicted RBP23.01■■□□□ 1.27
SH2D3A-201ENST00000245908 CHUKO15111 745 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 ATG7O95352 703 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 LDHAP00338 332 aaKnown RBP23■■□□□ 1.27
SH2D3A-201ENST00000245908 OATP04181 439 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 CLTAP09496 248 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 TAS2R40P59535 323 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 SP2Q02086 613 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 CCNG2Q16589 344 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 CHADLQ6NUI6 762 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 PPP1R2P3Q6NXS1 205 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 MICALL2Q8IY33 904 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 DEPTORQ8TB45 409 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 ZBTB45Q96K62 511 aaPredicted RBP23■■□□□ 1.27
SH2D3A-201ENST00000245908 CCDC114Q96M63 670 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 SCINQ9Y6U3 715 aa23■■□□□ 1.27
SH2D3A-201ENST00000245908 O00370 1275 aa22.99■■□□□ 1.27
SH2D3A-201ENST00000245908 RASSF9O75901 435 aa22.99■■□□□ 1.27
SH2D3A-201ENST00000245908 POTEJP0CG39 1038 aa22.99■■□□□ 1.27
SH2D3A-201ENST00000245908 TBXAS1P24557 533 aaPredicted RBP22.99■■□□□ 1.27
SH2D3A-201ENST00000245908 ARL2P36404 184 aa22.99■■□□□ 1.27
SH2D3A-201ENST00000245908 TRIP13Q15645 432 aaPredicted RBP22.99■■□□□ 1.27
SH2D3A-201ENST00000245908 DAB2IPQ5VWQ8 1189 aa22.99■■□□□ 1.27
SH2D3A-201ENST00000245908 TMEM270Q6UE05 265 aa22.99■■□□□ 1.27
SH2D3A-201ENST00000245908 PASD1Q8IV76 773 aa22.99■■□□□ 1.27
SH2D3A-201ENST00000245908 CCDC50Q8IVM0 306 aa22.99■■□□□ 1.27
SH2D3A-201ENST00000245908 WRNIP1Q96S55 665 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms