RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ANKARQ7Z5J8 1434 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 LMTK3Q96Q04 1460 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 CIITAP33076 1130 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 DEPDC1Q5TB30 811 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 C3orf62Q6ZUJ4 267 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 SPON2Q9BUD6 331 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 STK36Q9NRP7 1315 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 GFAPP14136 432 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 KCNA2P16389 499 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 DHX34Q14147 1143 aaKnown RBP7.9□□□□□ -1.15
RIF1-201ENST00000243326 NAB2Q15742 525 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 KLHL38Q2WGJ6 581 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 ZNF579Q8NAF0 562 aaKnown RBP7.9□□□□□ -1.15
RIF1-201ENST00000243326 FAM129AQ9BZQ8 928 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 C2orf71A6NGG8 1288 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 ZNF189O75820 626 aaPredicted RBP7.9□□□□□ -1.15
RIF1-201ENST00000243326 HSPA6P17066 643 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 GRK2P25098 689 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 AARSP49588 968 aaKnown RBP eCLIP7.9□□□□□ -1.15
RIF1-201ENST00000243326 DSG1Q02413 1049 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 CCDC60Q8IWA6 550 aaPredicted RBP7.9□□□□□ -1.15
RIF1-201ENST00000243326 CEP41Q9BYV8 373 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 RALAP11233 206 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 PLD3Q8IV08 490 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 AFG1LQ8WV93 481 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 PSPC1Q8WXF1 523 aaKnown RBP7.9□□□□□ -1.15
RIF1-201ENST00000243326 DHX38Q92620 1227 aaKnown RBP7.9□□□□□ -1.15
RIF1-201ENST00000243326 PWWP2AQ96N64 755 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 WNT8AQ9H1J5 351 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 SERPINB13Q9UIV8 391 aa7.9□□□□□ -1.15
RIF1-201ENST00000243326 FAM187AA6NFU0 413 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 BCAR1P56945 870 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 BYSLQ13895 437 aaKnown RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 EARS2Q5JPH6 523 aaKnown RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 SPDYAQ5MJ70 313 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 CLEC4GQ6UXB4 293 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 ARID3BQ8IVW6 561 aaPredicted RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 PHF20Q9BVI0 1012 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 SEMA6AQ9H2E6 1030 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 OSGEPQ9NPF4 335 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 XDHP47989 1333 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 NFIBO00712 420 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 ST3GAL1Q11201 340 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 TPCN2Q8NHX9 752 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 IPO11Q9UI26 975 aaKnown RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 NCF1BA6NI72 391 aaPredicted RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 NCF1CA8MVU1 366 aaPredicted RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 ORC4O43929 436 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 SRP72O76094 671 aaKnown RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 CBX6O95503 412 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 NCF1P14598 390 aaPredicted RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 CCDC103Q8IW40 242 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 C17orf80Q9BSJ5 609 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 FSD1LQ9BXM9 530 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 HERC5Q9UII4 1024 aaKnown RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 NRKQ7Z2Y5 1582 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 A0A1W2PQC6 194 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 H7C1W4 665 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 SMAPO00193 183 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 FAM107AO95990 144 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 KRT4P19013 534 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 SULT1E1P49888 294 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 KCNB1Q14721 858 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 NR1H4Q96RI1 486 aaPredicted RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 AXIN2Q9Y2T1 843 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 KPNA7A9QM74 516 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 UCHL3P15374 230 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 PRELPP51888 382 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 MTMR1Q13613 665 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 KDM7AQ6ZMT4 941 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 WDR11Q9BZH6 1224 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 CHEK2O96017 543 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 MYL2P10916 166 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 IL6STP40189 918 aaPredicted RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 CES3Q6UWW8 571 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 DENND5BQ6ZUT9 1274 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 RHOT1Q8IXI2 618 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 EGFL8Q99944 293 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 MOV10L1Q9BXT6 1211 aaKnown RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 MYLK2Q9H1R3 596 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 ZC3H7BQ9UGR2 993 aaKnown RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 AK5Q9Y6K8 562 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 AQP5P55064 265 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 TAF5Q15542 800 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 SERPIND1P05546 499 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 MRPL28Q13084 256 aaKnown RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 CLEC4FQ8N1N0 589 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 MKL2Q9ULH7 1088 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 PNMA8BQ9ULN7 279 aaPredicted RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 CSADQ9Y600 493 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 ALG6Q9Y672 507 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 PRPF4O43172 522 aaKnown RBP eCLIP7.89□□□□□ -1.152e-8■■■□□ 15.8
RIF1-201ENST00000243326 C11orf63Q6NUN7 778 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 PPP1R13LQ8WUF5 828 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 NAF1Q96HR8 494 aaKnown RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 DHX36Q9H2U1 1008 aaKnown RBP7.89□□□□□ -1.15
RIF1-201ENST00000243326 SLITRK6Q9H5Y7 841 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 CAPN10Q9HC96 672 aa7.89□□□□□ -1.15
RIF1-201ENST00000243326 SLC39A10Q9ULF5 831 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms