RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ODF2Q5BJF6 829 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 ZFYVE27Q5T4F4 411 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 DCLRE1AQ6PJP8 1040 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 TMEM270Q6UE05 265 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.93□□□□□ -0.53e-7■■■■□ 25.7
TNFAIP3-201ENST00000237289 KIAA1328Q86T90 577 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 STRA6Q9BX79 667 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 ENTPD7Q9NQZ7 604 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 DSEQ9UL01 958 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 THSD7BQ9C0I4 1608 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 RFX1P22670 979 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 PCSK1P29120 753 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 NCAPHQ15003 741 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 OR8K1Q8NGG5 319 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 DOCK5Q9H7D0 1870 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 TEX33O43247 280 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 FAM171A1Q5VUB5 890 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 CCDC186Q7Z3E2 898 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 C18orf25Q96B23 403 aaPredicted RBP11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.93□□□□□ -0.57e-7■■□□□ 14.1
TNFAIP3-201ENST00000237289 APEX2Q9UBZ4 518 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 RWDD3Q9Y3V2 267 aa11.93□□□□□ -0.5
TNFAIP3-201ENST00000237289 TTC26A0AVF1 554 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 ANKRD62A6NC57 917 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 NT5C1B-RDH14C9J2C7 533 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 H7C4K7 107 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 THAP12O43422 761 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 MED7O43513 233 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 SLC9A1P19634 815 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 MAGEA10P43363 369 aaPredicted RBP11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 BCAR1P56945 870 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 OR5B17Q8NGF7 314 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 RAD9AQ99638 391 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 ZMYM2Q9UBW7 1377 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 KPNA7A9QM74 516 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 FERP16591 822 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 PAX3P23760 479 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 GNL1P36915 607 aaPredicted RBP11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 PPP3CAQ08209 521 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 DNTTIP2Q5QJE6 756 aaKnown RBP11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 SMG8Q8ND04 991 aaKnown RBP11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 ZSWIM2Q8NEG5 633 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 PTPRHQ9HD43 1115 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 ST7Q9NRC1 585 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 TBC1D13Q9NVG8 400 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 SPG21Q9NZD8 308 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 A0A1B0GTH6 734 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 MGEA5O60502 916 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 PDGFRBP09619 1106 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 WEE2P0C1S8 567 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 CYP3A5P20815 502 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 WDR5P61964 334 aaKnown RBP11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 RAB30Q15771 203 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 SARM1Q6SZW1 724 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 AGMOQ6ZNB7 445 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 GOLGA2P5Q9HBQ8 144 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 IMPACTQ9P2X3 320 aa11.92□□□□□ -0.5
TNFAIP3-201ENST00000237289 A0A1W2PQC6 194 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 FBXL18Q96ME1 805 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 TMX1Q9H3N1 280 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 TUBGCP4Q9UGJ1 667 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 SF3B1O75533 1304 aaKnown RBP eCLIP11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 GFPT2O94808 682 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 DNAJB2P25686 324 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 GLYCTKQ8IVS8 523 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 DCP1BQ8IZD4 617 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 CEP72Q9P209 647 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 SSX2IPQ9Y2D8 614 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 EVPLQ92817 2033 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 GTPBP10A4D1E9 387 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 PROZP22891 400 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 ANXA13P27216 316 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 CASP14P31944 242 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 MBTPS1Q14703 1052 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 DRAP1Q14919 205 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 ZACNQ401N2 412 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 UBXN11Q5T124 520 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 TAF3Q5VWG9 929 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 GOLGA1Q92805 767 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 JAKMIP2Q96AA8 810 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 CXCL10P02778 98 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 ZNF18P17022 549 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 ADKP55263 362 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 YWHAHQ04917 246 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 ZNF280DQ6N043 979 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 MRPL10Q7Z7H8 261 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 VSTM4Q8IW00 320 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 ADGRF2Q8IZF7 708 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 LRRC52Q8N7C0 313 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 CCDC112Q8NEF3 446 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 SENP8Q96LD8 212 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 CNTN3Q9P232 1028 aa11.91□□□□□ -0.5
TNFAIP3-201ENST00000237289 CYP27A1Q02318 531 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 CTXN3Q4LDR2 81 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 CBWD6Q4V339 395 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 CBWD3Q5JTY5 395 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 CBWD5Q5RIA9 395 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms