RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 FAM84AQ96KN4 292 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 FAM81BQ96LP2 452 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 TRAIPQ9BWF2 469 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 KMT5AQ9NQR1 393 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 HTTP42858 3142 aa16.53■□□□□ 0.24
CTSD-201ENST00000236671 CFAP73A6NFT4 308 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 THAP12O43422 761 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 USP2O75604 605 aaPredicted RBP16.52■□□□□ 0.24
CTSD-201ENST00000236671 UBOX5O94941 541 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 MYBL1P10243 752 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 UMODL1Q5DID0 1318 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 USP37Q86T82 979 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 RPAINQ86UA6 219 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 ADGRA3Q8IWK6 1321 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 CPXCR1Q8N123 301 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 CKAP2Q8WWK9 683 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 SPIRE2Q8WWL2 714 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 POMGNT1Q8WZA1 660 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 NTPCRQ9BSD7 190 aaKnown RBP16.52■□□□□ 0.24
CTSD-201ENST00000236671 PAPPA2Q9BXP8 1791 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 ZNF341Q9BYN7 854 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 NOD2Q9HC29 1040 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 HOMER2Q9NSB8 354 aa16.52■□□□□ 0.24
CTSD-201ENST00000236671 ZC3H11AO75152 810 aaKnown RBP eCLIP16.52■□□□□ 0.233e-7■■■□□ 14.6
CTSD-201ENST00000236671 SFNP31947 248 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 SLC8A1P32418 973 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 SOX10P56693 466 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 RPS6P62753 249 aaKnown RBP16.52■□□□□ 0.23
CTSD-201ENST00000236671 PTP4A2Q12974 167 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 GALNTL6Q49A17 601 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 DAB2IPQ5VWQ8 1189 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 C15orf39Q6ZRI6 1047 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 PHLDB2Q86SQ0 1253 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 GPD1LQ8N335 351 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 GPATCH11Q8N954 259 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 CPA5Q8WXQ8 436 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 PWWP2AQ96N64 755 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 WRNIP1Q96S55 665 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 RAVER2Q9HCJ3 691 aaKnown RBP16.52■□□□□ 0.23
CTSD-201ENST00000236671 MLXIPLQ9NP71 852 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 LGALS13Q9UHV8 139 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 ANAPC5Q9UJX4 755 aa16.52■□□□□ 0.23
CTSD-201ENST00000236671 O00370 1275 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 GH1P01241 217 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 ASNSP08243 561 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 RALAP11233 206 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 CETPP11597 493 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 ADCY8P40145 1251 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 NCALDP61601 193 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 KRT76Q01546 638 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 CENPCQ03188 943 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 MKRN3Q13064 507 aaKnown RBP16.51■□□□□ 0.23
CTSD-201ENST00000236671 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.51■□□□□ 0.23
CTSD-201ENST00000236671 CYP4X1Q8N118 509 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 ANKRD42Q8N9B4 389 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 ATL2Q8NHH9 583 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 TRIM11Q96F44 468 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 C1orf112Q9NSG2 853 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.51■□□□□ 0.23
CTSD-201ENST00000236671 PROSCO94903 275 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 CYP1A1P04798 512 aaPredicted RBP16.51■□□□□ 0.23
CTSD-201ENST00000236671 MYCLP12524 364 aaPredicted RBP16.51■□□□□ 0.23
CTSD-201ENST00000236671 BRAFP15056 766 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 VPS41P49754 854 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 ENPEPQ07075 957 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 GRM1Q13255 1194 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 RIPK1Q13546 671 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 C2CD6Q53TS8 623 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 NUGGCQ68CJ6 796 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 MON1BQ7L1V2 547 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 TBC1D1Q86TI0 1168 aaPredicted RBP16.51■□□□□ 0.23
CTSD-201ENST00000236671 ZNF677Q86XU0 584 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 SAMD3Q8N6K7 520 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 ZNF516Q92618 1163 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 CXorf56Q9H5V9 222 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 SLC38A10Q9HBR0 1119 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 KCNK9Q9NPC2 374 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 TCEAL9Q9UHQ7 104 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 GGT7Q9UJ14 662 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 PCDHB2Q9Y5E7 798 aa16.51■□□□□ 0.23
CTSD-201ENST00000236671 HNRNPDLO14979 420 aaKnown RBP16.5■□□□□ 0.23
CTSD-201ENST00000236671 WDR46O15213 610 aaKnown RBP16.5■□□□□ 0.23
CTSD-201ENST00000236671 SUN1O94901 812 aa16.5■□□□□ 0.23
CTSD-201ENST00000236671 GJB6O95452 261 aa16.5■□□□□ 0.23
CTSD-201ENST00000236671 E2F5Q15329 346 aa16.5■□□□□ 0.23
CTSD-201ENST00000236671 TCP11Q8WWU5 503 aa16.5■□□□□ 0.23
CTSD-201ENST00000236671 HEMGNQ9BXL5 484 aa16.5■□□□□ 0.23
CTSD-201ENST00000236671 MAP3K20Q9NYL2 800 aaKnown RBP16.5■□□□□ 0.23
CTSD-201ENST00000236671 PSTPIP1O43586 416 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 GARTP22102 1010 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 NSFP46459 744 aaKnown RBP16.49■□□□□ 0.23
CTSD-201ENST00000236671 DGKZQ13574 1117 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 SPATA21Q7Z572 469 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 GDAP1Q8TB36 358 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 KLRG1Q96E93 195 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 FAM212AQ96EL1 285 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 PDCD2LQ9BRP1 358 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 FAM213AQ9BRX8 229 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 C17orf75Q9HAS0 396 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 GBA2Q9HCG7 927 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms