RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 LMTK3Q96Q04 1460 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 PSMG1O95456 288 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 RPA1P27694 616 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 PSMC4P43686 418 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 WDR4P57081 412 aaKnown RBP15.36■□□□□ 0.05
PRDM4-201ENST00000228437 ATP13A4Q4VNC1 1196 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 NOP9Q86U38 636 aaKnown RBP15.36■□□□□ 0.05
PRDM4-201ENST00000228437 RFWD2Q8NHY2 731 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 NACC1Q96RE7 527 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 IMPG2Q9BZV3 1241 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 ASTN1O14525 1302 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 LRRC37A3O60309 1634 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 DKC1O60832 514 aaKnown RBP eCLIP15.35■□□□□ 0.05
PRDM4-201ENST00000228437 FESP07332 822 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 CYTH1Q15438 398 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 PADI6Q6TGC4 694 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 PRPF39Q86UA1 669 aaKnown RBP15.35■□□□□ 0.05
PRDM4-201ENST00000228437 PDIK1LQ8N165 341 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 PYDC1Q8WXC3 89 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 OPTNQ96CV9 577 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 NDNQ99608 321 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 GLT8D2Q9H1C3 349 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 STXBP5LQ9Y2K9 1186 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 RGPD2P0DJD1 1756 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 NID2Q14112 1375 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 SLC16A3O15427 465 aaKnown RBP15.35■□□□□ 0.05
PRDM4-201ENST00000228437 MAP3K6O95382 1288 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 EYA4O95677 639 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 HIF1AQ16665 826 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 WASHC2DQ5SRD0 308 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 CDCA2Q69YH5 1023 aaPredicted RBP15.35■□□□□ 0.05
PRDM4-201ENST00000228437 TMEM270Q6UE05 265 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 APOL6Q9BWW8 343 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 WHRNQ9P202 907 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 SMG5Q9UPR3 1016 aaKnown RBP15.35■□□□□ 0.05
PRDM4-201ENST00000228437 IRF6O14896 467 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 CCNFP41002 786 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 CAV1Q03135 178 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 FASTKD3Q14CZ7 662 aaKnown RBP15.35■□□□□ 0.05
PRDM4-201ENST00000228437 SMTNL2Q2TAL5 461 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 MAP7D3Q8IWC1 876 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.35■□□□□ 0.05
PRDM4-201ENST00000228437 NME8Q8N427 588 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 BTBD10Q9BSF8 475 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 PICK1Q9NRD5 415 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 H7C0C1 242 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 ATP5OP48047 213 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 SH2D4BQ5SQS7 431 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 IYDQ6PHW0 289 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 ACCSQ96QU6 501 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 TMEM121Q9BTD3 319 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 RANBP17Q9H2T7 1088 aaKnown RBP15.35■□□□□ 0.05
PRDM4-201ENST00000228437 PSMC3IPQ9P2W1 217 aaPredicted RBP15.35■□□□□ 0.05
PRDM4-201ENST00000228437 PCYOX1Q9UHG3 505 aa15.35■□□□□ 0.05
PRDM4-201ENST00000228437 hCG_1984214I3L0E3 225 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 EML1O00423 815 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 RTN3O95197 1032 aaPredicted RBP15.34■□□□□ 0.05
PRDM4-201ENST00000228437 SLC12A3P55017 1021 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 BRDTQ58F21 947 aaPredicted RBP15.34■□□□□ 0.05
PRDM4-201ENST00000228437 SCYL2Q6P3W7 929 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 RFX6Q8HWS3 928 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 GALNT4Q8N4A0 578 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 ZNF713Q8N859 430 aaPredicted RBP15.34■□□□□ 0.05
PRDM4-201ENST00000228437 MPP4Q96JB8 637 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 ZNF184Q99676 751 aaPredicted RBP15.34■□□□□ 0.05
PRDM4-201ENST00000228437 KIAA1586Q9HCI6 787 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 SAE1Q9UBE0 346 aaPredicted RBP15.34■□□□□ 0.05
PRDM4-201ENST00000228437 M0R2N6 131 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 CETPP11597 493 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 DESP17661 470 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 SAT1P21673 171 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 DSG1Q02413 1049 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 NR1H3Q13133 447 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 ITPK1Q13572 414 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 TFDP1Q14186 410 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 RASA2Q15283 850 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 TTC7BQ86TV6 843 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 TTC16Q8NEE8 873 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 ASAP3Q8TDY4 903 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 LXNQ9BS40 222 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 LRMDAQ9H2I8 198 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 CHCHD3Q9NX63 227 aaKnown RBP15.34■□□□□ 0.05
PRDM4-201ENST00000228437 TXNDC16Q9P2K2 825 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 BTNL10A8MVZ5 291 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 HNRNPRO43390 633 aaKnown RBP15.34■□□□□ 0.05
PRDM4-201ENST00000228437 PDE5AO76074 875 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 MGAT5Q09328 741 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 ORC2Q13416 577 aaPredicted RBP15.34■□□□□ 0.05
PRDM4-201ENST00000228437 NXNQ6DKJ4 435 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 SLFN11Q7Z7L1 901 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 RSPH3Q86UC2 560 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 EHMT1Q9H9B1 1298 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 PDP2Q9P2J9 529 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 USP20Q9Y2K6 914 aa15.34■□□□□ 0.05
PRDM4-201ENST00000228437 FCHO1O14526 889 aa15.33■□□□□ 0.05
PRDM4-201ENST00000228437 MSH4O15457 936 aa15.33■□□□□ 0.05
PRDM4-201ENST00000228437 DRG2P55039 364 aaKnown RBP15.33■□□□□ 0.05
PRDM4-201ENST00000228437 C16orf86Q6ZW13 317 aa15.33■□□□□ 0.05
PRDM4-201ENST00000228437 PCDHB18PQ96TA0 734 aa15.33■□□□□ 0.05
PRDM4-201ENST00000228437 TUBB6Q9BUF5 446 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms