RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 DNAJC9Q8WXX5 260 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 IFT43Q96FT9 208 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 CFAP57Q96MR6 1250 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 DCLRE1BQ9H816 532 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 SAR1AQ9NR31 198 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 SENP1Q9P0U3 644 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 UMODL1Q5DID0 1318 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 NRXN2Q9P2S2 1712 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 LRRD1A4D1F6 860 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 ARHGEF35A5YM69 484 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 PLSCR1O15162 318 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 BBOX1O75936 387 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 SNUPNO95149 360 aaKnown RBP16.4■□□□□ 0.22
VTN-201ENST00000226218 LMNAP02545 664 aaKnown RBP16.4■□□□□ 0.22
VTN-201ENST00000226218 RPA3P35244 121 aaPredicted RBP16.4■□□□□ 0.22
VTN-201ENST00000226218 PCK1P35558 622 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 RASA2Q15283 850 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 PKN2Q16513 984 aaKnown RBP16.4■□□□□ 0.22
VTN-201ENST00000226218 TATDN1Q6P1N9 297 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 C4orf50Q6ZRC1 276 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 CEP128Q6ZU80 1094 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 ZNF398Q8TD17 642 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 RBM17Q96I25 401 aaKnown RBP16.4■□□□□ 0.22
VTN-201ENST00000226218 COA1Q9GZY4 146 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.4■□□□□ 0.22
VTN-201ENST00000226218 KANSL3Q9P2N6 904 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 HNRNPCL1O60812 293 aaKnown RBP16.4■□□□□ 0.22
VTN-201ENST00000226218 BMP3P12645 472 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 PECAM1P16284 738 aaPredicted RBP16.4■□□□□ 0.22
VTN-201ENST00000226218 KLC1Q07866 573 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 TAF1BQ53T94 588 aaPredicted RBP16.4■□□□□ 0.22
VTN-201ENST00000226218 AP1ARQ63HQ0 302 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 CWF19L1Q69YN2 538 aaKnown RBP16.4■□□□□ 0.22
VTN-201ENST00000226218 CYP4F22Q6NT55 531 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 SLC30A9Q6PML9 568 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 PADI6Q6TGC4 694 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 MCOLN2Q8IZK6 566 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 LRRC8CQ8TDW0 803 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 WDR11Q9BZH6 1224 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 ST6GALNAC4Q9H4F1 302 aa16.4■□□□□ 0.22
VTN-201ENST00000226218 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.4■□□□□ 0.22
VTN-201ENST00000226218 SLX4Q8IY92 1834 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 SP100P23497 879 aaPredicted RBP16.39■□□□□ 0.21
VTN-201ENST00000226218 MARK3P27448 753 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 RAB27AP51159 221 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 SCNN1DP51172 638 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 SNRPFP62306 86 aaKnown RBP16.39■□□□□ 0.21
VTN-201ENST00000226218 GTF2BQ00403 316 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 TSNAXIP1Q2TAA8 658 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 PCNX4Q63HM2 1172 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 ZNF365Q70YC5 407 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 NLRP9Q7RTR0 991 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 APBB1IPQ7Z5R6 666 aaPredicted RBP16.39■□□□□ 0.21
VTN-201ENST00000226218 MFN1Q8IWA4 741 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 FAM81BQ96LP2 452 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 TTC25Q96NG3 672 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 KCNQ5Q9NR82 932 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 NMRK1Q9NWW6 199 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 LARSQ9P2J5 1176 aaKnown RBP16.39■□□□□ 0.21
VTN-201ENST00000226218 DDTLA6NHG4 134 aaPredicted RBP16.39■□□□□ 0.21
VTN-201ENST00000226218 H0Y3Z8 333 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 DNALI1O14645 258 aaPredicted RBP16.39■□□□□ 0.21
VTN-201ENST00000226218 PDHA1P08559 390 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 ARP10275 920 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 HOXA10P31260 410 aaPredicted RBP16.39■□□□□ 0.21
VTN-201ENST00000226218 BIRC2Q13490 618 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 P3H1Q32P28 736 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 KHDC1Q4VXA5 237 aaKnown RBP16.39■□□□□ 0.21
VTN-201ENST00000226218 PLEKHG4Q58EX7 1191 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 KRT39Q6A163 491 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 OR52E8Q6IFG1 317 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 IRGCQ6NXR0 463 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 RFWD3Q6PCD5 774 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 TMEM179Q6ZVK1 233 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 ZNF276Q8N554 614 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 DHX38Q92620 1227 aaKnown RBP16.39■□□□□ 0.21
VTN-201ENST00000226218 TSC22D3Q99576 134 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 CADM1Q9BY67 442 aaKnown RBP16.39■□□□□ 0.21
VTN-201ENST00000226218 SSU72Q9NP77 194 aaKnown RBP16.39■□□□□ 0.21
VTN-201ENST00000226218 SAYSD1Q9NPB0 183 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 PRR12Q9ULL5 1215 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 MYPNQ86TC9 1320 aa16.39■□□□□ 0.21
VTN-201ENST00000226218 PSTPIP1O43586 416 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 CNGA1P29973 690 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 PAPOLAP51003 745 aaKnown RBP16.38■□□□□ 0.21
VTN-201ENST00000226218 GRIPAP1Q4V328 841 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 CEP55Q53EZ4 464 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 SH3BP5LQ7L8J4 393 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 CLNKQ7Z7G1 428 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 C4orf33Q8N1A6 199 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 OGFOD1Q8N543 542 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 ZFAND2BQ8WV99 257 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 ZNF75CPQ92670 426 aaPredicted RBP16.38■□□□□ 0.21
VTN-201ENST00000226218 KIFAP3Q92845 792 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 SMC6Q96SB8 1091 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 FAM118BQ9BPY3 351 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 HEMGNQ9BXL5 484 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 TMEM8AQ9HCN3 771 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 ZFP69BQ9UJL9 534 aa16.38■□□□□ 0.21
VTN-201ENST00000226218 CCNL1Q9UK58 526 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms