RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 TAOK1Q7L7X3 1001 aa23.4■■□□□ 1.34
SMARCD2-201ENST00000225742 BBXQ8WY36 941 aaPredicted RBP23.4■■□□□ 1.34
SMARCD2-201ENST00000225742 CHMP6Q96FZ7 201 aa23.4■■□□□ 1.34
SMARCD2-201ENST00000225742 HAPLN2Q9GZV7 340 aa23.4■■□□□ 1.34
SMARCD2-201ENST00000225742 CCDC134Q9H6E4 229 aa23.4■■□□□ 1.34
SMARCD2-201ENST00000225742 APOBEC3GQ9HC16 384 aaKnown RBP23.4■■□□□ 1.34
SMARCD2-201ENST00000225742 ASIC3Q9UHC3 531 aa23.4■■□□□ 1.34
SMARCD2-201ENST00000225742 CNTNAP2Q9UHC6 1331 aa23.39■■□□□ 1.34
SMARCD2-201ENST00000225742 TLDC2A0PJX2 215 aa23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 SORBS3O60504 671 aa23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 DRD4P21917 467 aa23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 CETN2P41208 172 aa23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 TARBP2Q15633 366 aaKnown RBP23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 CCNG2Q16589 344 aa23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 GKAP1Q5VSY0 366 aaPredicted RBP23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 CACNA2D3Q8IZS8 1091 aa23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 RBBP8NLQ8NC74 664 aaPredicted RBP23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 EXD1Q8NHP7 514 aa23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 ELMO3Q96BJ8 720 aa23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 ACTR5Q9H9F9 607 aaPredicted RBP23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 EFCC1Q9HA90 598 aa23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 ZNF541Q9H0D2 1346 aa23.39■■□□□ 1.33
SMARCD2-201ENST00000225742 ADCY3O60266 1144 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 CALCAP01258 141 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 FGFR4P22455 802 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 ATP5DP30049 168 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 WNT7BP56706 349 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 NOP14P78316 857 aaKnown RBP23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 KLF1Q13351 362 aaPredicted RBP23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 MAMLD1Q13495 774 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 TMEM270Q6UE05 265 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 SEC16BQ96JE7 1060 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 SERPINB12Q96P63 405 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 TARS2Q9BW92 718 aaKnown RBP23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 PTPRJQ12913 1337 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 WDR90Q96KV7 1748 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 ATF2P15336 505 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 CHN1P15882 459 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 IVDP26440 423 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 EFNA5P52803 228 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 AUHQ13825 339 aaKnown RBP23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 SPOPLQ6IQ16 392 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 CCDC121Q6ZUS5 278 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 CPLX4Q7Z7G2 160 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 UBR7Q8N806 425 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 ZBTB45Q96K62 511 aaPredicted RBP23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 TRAIPQ9BWF2 469 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 FOXP3Q9BZS1 431 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 IMPG2Q9BZV3 1241 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 TRIM7Q9C029 511 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 CHST7Q9NS84 486 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 PARVAQ9NVD7 372 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 IP6K2Q9UHH9 426 aa23.38■■□□□ 1.33
SMARCD2-201ENST00000225742 ALDH5A1P51649 535 aaPredicted RBP23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 ZNF132P52740 706 aa23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 IFT88Q13099 833 aa23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 NEDD9Q14511 834 aa23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 SURF1Q15526 300 aa23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 RNF187Q5TA31 235 aaPredicted RBP23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 BRSK2Q8IWQ3 736 aa23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 ANKRD35Q8N283 1001 aa23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 FEZF2Q8TBJ5 459 aa23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 ATXN2LQ8WWM7 1075 aaKnown RBP23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 SELENOSQ9BQE4 189 aa23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 C11orf70Q9BRQ4 267 aa23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 ADAM7Q9H2U9 754 aa23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 CDC42EP4Q9H3Q1 356 aaKnown RBP23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 AAASQ9NRG9 546 aa23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 SSC5DA1L4H1 1573 aa23.37■■□□□ 1.33
SMARCD2-201ENST00000225742 GSTTP1A0A1W2PQM5 241 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 TP73O15350 636 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 TCEA3O75764 348 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 LSM8O95777 96 aaKnown RBP23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 LMNB2Q03252 620 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 SNX1Q13596 522 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 NCOA4Q13772 614 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 POTEAQ6S8J7 498 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 WDR49Q8IV35 697 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 MDM1Q8TC05 714 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 CABS1Q96KC9 395 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 FAM167AQ96KS9 214 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 SCLT1Q96NL6 688 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 NEU2Q9Y3R4 380 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 ASAP2O43150 1006 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 THAP12O43422 761 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 MAFO75444 373 aaPredicted RBP23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 CALB1P05937 261 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 TGFB3P10600 412 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 IFI35P80217 286 aaPredicted RBP23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 SEPT14Q6ZU15 432 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 CCDC25Q86WR0 208 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 RIOX2Q8IUF8 465 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 EXOC8Q8IYI6 725 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 CNPY4Q8N129 248 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 CCDC89Q8N998 374 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 EPS8L3Q8TE67 593 aaKnown RBP23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 ZNF526Q8TF50 670 aaPredicted RBP23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 FAM84AQ96KN4 292 aa23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 ZNF317Q96PQ6 595 aaPredicted RBP23.36■■□□□ 1.33
SMARCD2-201ENST00000225742 OSBPL8Q9BZF1 889 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms