RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 HMOX2P30519 316 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 UGP2Q16851 508 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 TDRD10Q5VZ19 366 aaKnown RBP19.92■□□□□ 0.78
SMPD3-201ENST00000219334 DHX40Q8IX18 779 aaKnown RBP19.92■□□□□ 0.78
SMPD3-201ENST00000219334 KIFC3Q9BVG8 833 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 PNPLA6Q8IY17 1366 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 IQGAP3Q86VI3 1631 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 C2CD2LO14523 706 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 RPA1P27694 616 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 KRT35Q92764 455 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 MROH8Q9H579 483 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 ADGRG1Q9Y653 693 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 LAMC1P11047 1609 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 FAM205CA6NFA0 338 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 MYBP10242 640 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 BFSP2Q13515 415 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 EDRF1Q3B7T1 1238 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 CNPY4Q8N129 248 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 CYTH2Q99418 400 aa19.92■□□□□ 0.78
SMPD3-201ENST00000219334 HOXA2O43364 376 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 GCKP35557 465 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 MMP14P50281 582 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 NIF3L1Q9GZT8 377 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 KLHL11Q9NVR0 708 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 TPX2Q9ULW0 747 aaKnown RBP19.91■□□□□ 0.78
SMPD3-201ENST00000219334 PCSK9Q8NBP7 692 aaKnown RBP19.91■□□□□ 0.78
SMPD3-201ENST00000219334 TSPAN17Q96FV3 270 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 HPDLQ96IR7 371 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 MCEEQ96PE7 176 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 ZFP69BQ9UJL9 534 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 EIF3DO15371 548 aaKnown RBP eCLIP19.91■□□□□ 0.78
SMPD3-201ENST00000219334 FAM200BP0CF97 657 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 ODC1P11926 461 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 TAF1DQ9H5J8 278 aaPredicted RBP19.91■□□□□ 0.78
SMPD3-201ENST00000219334 TMEM8AQ9HCN3 771 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 RNF17Q9BXT8 1623 aaKnown RBP19.91■□□□□ 0.78
SMPD3-201ENST00000219334 PPP4CP60510 307 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 PCDHB2Q9Y5E7 798 aa19.91■□□□□ 0.78
SMPD3-201ENST00000219334 APRTP07741 180 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 MAGOHP61326 146 aaKnown RBP19.9■□□□□ 0.78
SMPD3-201ENST00000219334 DCAF6Q58WW2 860 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 TARS2Q9BW92 718 aaKnown RBP19.9■□□□□ 0.78
SMPD3-201ENST00000219334 SFMBT1Q9UHJ3 866 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 MYMKA6NI61 221 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 RHOBTB3O94955 611 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 ADSSL1Q8N142 457 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 H7C4K7 107 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 HAUS5O94927 633 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 NPEPPSP55786 919 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 NCAPHQ15003 741 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 ZC2HC1CQ53FD0 456 aaPredicted RBP19.9■□□□□ 0.78
SMPD3-201ENST00000219334 ABI2Q9NYB9 513 aaPredicted RBP19.9■□□□□ 0.78
SMPD3-201ENST00000219334 ADA2Q9NZK5 511 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 ZNF609O15014 1411 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 TADA3O75528 432 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 ARFIP2P53365 341 aa19.9■□□□□ 0.78
SMPD3-201ENST00000219334 GRAP2O75791 330 aa19.89■□□□□ 0.78
SMPD3-201ENST00000219334 ATP5HO75947 161 aa19.89■□□□□ 0.78
SMPD3-201ENST00000219334 E2F5Q15329 346 aa19.89■□□□□ 0.78
SMPD3-201ENST00000219334 MAPRE2Q15555 327 aa19.89■□□□□ 0.78
SMPD3-201ENST00000219334 CYP4A22Q5TCH4 519 aa19.89■□□□□ 0.78
SMPD3-201ENST00000219334 COL23A1Q86Y22 540 aaPredicted RBP19.89■□□□□ 0.78
SMPD3-201ENST00000219334 SMYD3Q9H7B4 428 aa19.89■□□□□ 0.78
SMPD3-201ENST00000219334 EPB41L4AQ9HCS5 686 aaPredicted RBP19.89■□□□□ 0.78
SMPD3-201ENST00000219334 ARHGEF38Q9NXL2 777 aa19.89■□□□□ 0.78
SMPD3-201ENST00000219334 KIF17Q9P2E2 1029 aa19.89■□□□□ 0.78
SMPD3-201ENST00000219334 STX18Q9P2W9 335 aaKnown RBP19.89■□□□□ 0.78
SMPD3-201ENST00000219334 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.89■□□□□ 0.78
SMPD3-201ENST00000219334 UCHL3P15374 230 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 VEGFAP15692 232 aaPredicted RBP19.89■□□□□ 0.77
SMPD3-201ENST00000219334 ARMC6Q6NXE6 501 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 SYDE1Q6ZW31 735 aaPredicted RBP19.89■□□□□ 0.77
SMPD3-201ENST00000219334 CLMNQ96JQ2 1002 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 ING2Q9H160 280 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 C17orf75Q9HAS0 396 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 DCTN4Q9UJW0 460 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 ESYT3A0FGR9 886 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 FOXP2O15409 715 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 WEE2P0C1S8 567 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 PDK1Q15118 436 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 COBLL1Q53SF7 1204 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 ZNF484Q5JVG2 852 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 METTL16Q86W50 562 aaKnown RBP19.89■□□□□ 0.77
SMPD3-201ENST00000219334 TRIML2Q8N7C3 387 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 PTPRN2Q92932 1015 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 PRMT6Q96LA8 375 aaPredicted RBP19.89■□□□□ 0.77
SMPD3-201ENST00000219334 RUBCNLQ9H714 662 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 LIMA1Q9UHB6 759 aaKnown RBP19.89■□□□□ 0.77
SMPD3-201ENST00000219334 MAD2L2Q9UI95 211 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 MED14O60244 1454 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 SPDYE5A6NIY4 337 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 EEF1DP29692 281 aaKnown RBP19.89■□□□□ 0.77
SMPD3-201ENST00000219334 TRADDQ15628 312 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 SPDYE7PQ495Y7 208 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 SCHIP1Q9P0W5 487 aaPredicted RBP19.89■□□□□ 0.77
SMPD3-201ENST00000219334 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.89■□□□□ 0.77
SMPD3-201ENST00000219334 KDM1AO60341 852 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 BACE1P56817 501 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 GOLGA7BQ2TAP0 167 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 TRAPPC11Q7Z392 1133 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms