RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 BMP15O95972 392 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 CHRM2P08172 466 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 ELFN1P0C7U0 828 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 SRGNP10124 158 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 FCER1AP12319 257 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 ID4P47928 161 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 SOX10P56693 466 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 FPGSQ05932 587 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 PPP3CAQ08209 521 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 SLFN5Q08AF3 891 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 NBPF8Q3BBV2 869 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 FAM153CQ494X1 144 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 Q8NA96 180 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 SLC30A5Q8TAD4 765 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 LPIN2Q92539 896 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 HOXB13Q92826 284 aaPredicted RBP3.79□□□□□ -1.8
CDKN3-201ENST00000216414 INTS13Q9NVM9 706 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 PLAAQ9Y263 795 aa3.79□□□□□ -1.8
CDKN3-201ENST00000216414 ZNF804BA4D1E1 1349 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 AOX1Q06278 1338 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 GOLGA8AA7E2F4 631 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 LINC00473A8K010 186 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 ADM5C9JUS6 153 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 PROM1O43490 865 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 MTHFD2P13995 350 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 BPIP17213 487 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 PTGER1P34995 402 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 CREMQ03060 361 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 GRM1Q13255 1194 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 LLGL1Q15334 1064 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 PREPLQ4J6C6 727 aaPredicted RBP3.78□□□□□ -1.8
CDKN3-201ENST00000216414 TMEM119Q4V9L6 283 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 DALRD3Q5D0E6 543 aaKnown RBP3.78□□□□□ -1.8
CDKN3-201ENST00000216414 TOR2AQ5JU69 321 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 CMIPQ8IY22 773 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 SREK1Q8WXA9 508 aaKnown RBP3.78□□□□□ -1.8
CDKN3-201ENST00000216414 HAPLN3Q96S86 360 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 IFT22Q9H7X7 185 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 FLRT1Q9NZU1 646 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 ADAM21Q9UKJ8 722 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 CDYLQ9Y232 598 aa3.78□□□□□ -1.8
CDKN3-201ENST00000216414 PRAMEF33A0A0G2JMD5 474 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 A0A1W2PS29 197 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 NEMP1O14524 444 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 TP73O15350 636 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 PDE8AO60658 829 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 PRAMEF10O60809 474 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 CDC45O75419 566 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 IGKV2-30P06310 120 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 PRR35P0CG20 571 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 GSPT1P15170 499 aaKnown RBP3.77□□□□□ -1.81
CDKN3-201ENST00000216414 GATA3P23771 443 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 MCAMP43121 646 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 SLC6A9P48067 706 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 RPS7P62081 194 aaKnown RBP3.77□□□□□ -1.81
CDKN3-201ENST00000216414 SLC10A2Q12908 348 aaPredicted RBP3.77□□□□□ -1.81
CDKN3-201ENST00000216414 EIF2B5Q13144 721 aaKnown RBP3.77□□□□□ -1.81
CDKN3-201ENST00000216414 MTM1Q13496 603 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 SEPT2Q15019 361 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 TXNRD1Q16881 649 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 CD300EQ496F6 205 aaPredicted RBP3.77□□□□□ -1.81
CDKN3-201ENST00000216414 ZNF626Q68DY1 528 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 CLNKQ7Z7G1 428 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 RASAL3Q86YV0 1011 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 MYCBPAPQ8TBZ2 947 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 PGBD1Q96JS3 809 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 FCRL4Q96PJ5 515 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 TLR10Q9BXR5 811 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 PIF1Q9H611 641 aa3.77□□□□□ -1.81
CDKN3-201ENST00000216414 LINC01548A6NM66 108 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 CBSLP0DN79 551 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 KCNA2P16389 499 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 DDCP20711 480 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 CBSP35520 551 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 SCAND1P57086 179 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 SRSF2Q01130 221 aaKnown RBP3.76□□□□□ -1.81
CDKN3-201ENST00000216414 MALLQ13021 153 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 KLF9Q13886 244 aaPredicted RBP3.76□□□□□ -1.81
CDKN3-201ENST00000216414 PTPRRQ15256 657 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 ETFDHQ16134 617 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 ATP2B3Q16720 1220 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 ANO4Q32M45 955 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 SUMO4Q6EEV6 95 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 ZNF782Q6ZMW2 699 aaPredicted RBP3.76□□□□□ -1.81
CDKN3-201ENST00000216414 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.76□□□□□ -1.81
CDKN3-201ENST00000216414 WASF1Q92558 559 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 RPL36ALQ969Q0 106 aaKnown RBP3.76□□□□□ -1.81
CDKN3-201ENST00000216414 CYFIP2Q96F07 1278 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 TTC1Q99614 292 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 MANSC1Q9H8J5 431 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 NRIP3Q9NQ35 241 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 PADI4Q9UM07 663 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 DNM3Q9UQ16 869 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 PCDHGA2Q9Y5H1 932 aa3.76□□□□□ -1.81
CDKN3-201ENST00000216414 ZNF521Q96K83 1311 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 FAM171A2A8MVW0 826 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 TOR1BO14657 336 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 HAUS5O94927 633 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 AMY1AP04745 511 aa3.75□□□□□ -1.81
CDKN3-201ENST00000216414 MYCLP1P12525 358 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms