RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 HIBCHQ6NVY1 386 aaPredicted RBP14□□□□□ -0.17
CTNS-201ENST00000046640 ZDHHC24Q6UX98 284 aa14□□□□□ -0.17
CTNS-201ENST00000046640 CCDC50Q8IVM0 306 aa14□□□□□ -0.17
CTNS-201ENST00000046640 C1orf131Q8NDD1 294 aaKnown RBP14□□□□□ -0.17
CTNS-201ENST00000046640 TCP11Q8WWU5 503 aa14□□□□□ -0.17
CTNS-201ENST00000046640 VTI1AQ96AJ9 217 aa14□□□□□ -0.17
CTNS-201ENST00000046640 C12orf42Q96LP6 360 aa14□□□□□ -0.17
CTNS-201ENST00000046640 RPS6KC1Q96S38 1066 aa14□□□□□ -0.17
CTNS-201ENST00000046640 PPP1R16BQ96T49 567 aa14□□□□□ -0.17
CTNS-201ENST00000046640 PCYT2Q99447 389 aa14□□□□□ -0.17
CTNS-201ENST00000046640 EPB41L4BQ9H329 900 aa14□□□□□ -0.17
CTNS-201ENST00000046640 GSTTP1A0A1W2PQM5 241 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 BHMG1C9JSJ3 638 aaPredicted RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 CHUKO15111 745 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 C4BPAP04003 597 aaKnown RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 RPSAP08865 295 aaKnown RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 NSFP46459 744 aaKnown RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 ALDH5A1P51649 535 aaPredicted RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 HADHBP55084 474 aaKnown RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 SNCBQ16143 134 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 ZACNQ401N2 412 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 ZFYVE27Q5T4F4 411 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 PNMA8AQ86V59 439 aaPredicted RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 MCOLN2Q8IZK6 566 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 GIMAP7Q8NHV1 300 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 TRAPPC12Q8WVT3 735 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 PORCNQ9H237 461 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 TPX2Q9ULW0 747 aaKnown RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 NUB1Q9Y5A7 615 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 PCDHA3Q9Y5H8 950 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 MAFBQ9Y5Q3 323 aaPredicted RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 NFASCO94856 1347 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 ATXN2Q99700 1313 aaKnown RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 RGPD3A6NKT7 1758 aaPredicted RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 RGPD4Q7Z3J3 1758 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 PPFIA2O75334 1257 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 GGPS1O95749 300 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 CST3P01034 146 aaPredicted RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 CLTAP09496 248 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 TCF7P36402 384 aaPredicted RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 STAT5BP51692 787 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 PRUNE1Q86TP1 453 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.99□□□□□ -0.17
CTNS-201ENST00000046640 PRPF31Q8WWY3 499 aaKnown RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 SEC14L1Q92503 715 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 CLMNQ96JQ2 1002 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 ELP3Q9H9T3 547 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 CHST7Q9NS84 486 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 INTS9Q9NV88 658 aaKnown RBP13.99□□□□□ -0.17
CTNS-201ENST00000046640 GRHL1Q9NZI5 618 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 SNCAIPQ9Y6H5 919 aa13.99□□□□□ -0.17
CTNS-201ENST00000046640 MROH7Q68CQ1 1323 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 SOWAHBA6NEL2 793 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 PMM2O15305 246 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 CSDE1O75534 798 aaKnown RBP13.98□□□□□ -0.17
CTNS-201ENST00000046640 ACSL3O95573 720 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 UNGP13051 313 aaPredicted RBP13.98□□□□□ -0.17
CTNS-201ENST00000046640 CHRNA3P32297 505 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 COILP38432 576 aaPredicted RBP13.98□□□□□ -0.17
CTNS-201ENST00000046640 GCNT1Q02742 428 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 CAPSQ13938 189 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 ERMARDQ5T6L9 678 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 TBC1D1Q86TI0 1168 aaPredicted RBP13.98□□□□□ -0.17
CTNS-201ENST00000046640 HOOK3Q86VS8 718 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 FAM228AQ86W67 206 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 CCDC197Q8NCU1 140 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 PWWP2AQ96N64 755 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 RASAL2Q9UJF2 1139 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 MYPNQ86TC9 1320 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 POLR2AP24928 1970 aaKnown RBP13.98□□□□□ -0.17
CTNS-201ENST00000046640 MYH9P35579 1960 aaKnown RBP13.98□□□□□ -0.17
CTNS-201ENST00000046640 PHIPQ8WWQ0 1821 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 IRF6O14896 467 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 THAP12O43422 761 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 CTNNA2P26232 953 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 PSEN1P49768 467 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 PSMD6Q15008 389 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 LONRF1Q17RB8 773 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 SGO2Q562F6 1265 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 SCARA5Q6ZMJ2 495 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 C15orf39Q6ZRI6 1047 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 DYDC1Q8WWB3 177 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 PABPC3Q9H361 631 aaKnown RBP13.98□□□□□ -0.17
CTNS-201ENST00000046640 DHX33Q9H6R0 707 aaKnown RBP13.98□□□□□ -0.17
CTNS-201ENST00000046640 MTUS1Q9ULD2 1270 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 PCDHB2Q9Y5E7 798 aa13.98□□□□□ -0.17
CTNS-201ENST00000046640 FARP2O94887 1054 aaPredicted RBP13.97□□□□□ -0.17
CTNS-201ENST00000046640 CREB1P16220 341 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 GNA15P30679 374 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 GTF2H1P32780 548 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 DHX34Q14147 1143 aaKnown RBP13.97□□□□□ -0.17
CTNS-201ENST00000046640 HSDL1Q3SXM5 330 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 ANKRD42Q8N9B4 389 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 EIF1ADQ8N9N8 165 aaKnown RBP13.97□□□□□ -0.17
CTNS-201ENST00000046640 FAM129AQ9BZQ8 928 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 ACTR5Q9H9F9 607 aaPredicted RBP13.97□□□□□ -0.17
CTNS-201ENST00000046640 UVRAGQ9P2Y5 699 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 RLFQ13129 1914 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 SSC5DA1L4H1 1573 aa13.97□□□□□ -0.17
CTNS-201ENST00000046640 ARIH2O95376 493 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms